Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Slc6a11P31650 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Slc6a11P31650 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Slc6a11P31650 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Slc6a11P31650 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Slc6a11P31650 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Slc6a11P31650 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Slc6a11P31650 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Slc6a11P31650 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
Slc6a11P31650 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Slc6a11P31650 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Slc6a11P31650 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Slc6a11P31650 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Slc6a11P31650 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Slc6a11P31650 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.68■□□□□ 0.1
Slc6a11P31650 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Slc6a11P31650 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.68■□□□□ 0.1
Slc6a11P31650 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
Slc6a11P31650 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Slc6a11P31650 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Slc6a11P31650 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Slc6a11P31650 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Slc6a11P31650 Gm10013-201ENSMUST00000106074 672 ntBASIC15.68■□□□□ 0.1
Slc6a11P31650 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Slc6a11P31650 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Slc6a11P31650 Gm17661-201ENSMUST00000170317 270 ntBASIC15.68■□□□□ 0.1
Slc6a11P31650 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Slc6a11P31650 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Slc6a11P31650 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Slc6a11P31650 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Slc6a11P31650 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Slc6a11P31650 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Slc6a11P31650 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc6a11P31650 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Slc6a11P31650 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Slc6a11P31650 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15.67■□□□□ 0.1
Slc6a11P31650 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Slc6a11P31650 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc6a11P31650 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Slc6a11P31650 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc6a11P31650 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Slc6a11P31650 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Slc6a11P31650 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Slc6a11P31650 AA414768-201ENSMUST00000121924 1257 ntBASIC15.67■□□□□ 0.1
Slc6a11P31650 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc6a11P31650 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Slc6a11P31650 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Slc6a11P31650 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc6a11P31650 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC15.67■□□□□ 0.1
Slc6a11P31650 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc6a11P31650 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Slc6a11P31650 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Slc6a11P31650 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc6a11P31650 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc6a11P31650 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc6a11P31650 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc6a11P31650 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc6a11P31650 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc6a11P31650 Gm9694-201ENSMUST00000193347 1189 ntBASIC15.66■□□□□ 0.1
Slc6a11P31650 Gm33142-201ENSMUST00000193913 867 ntBASIC15.66■□□□□ 0.1
Slc6a11P31650 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc6a11P31650 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc6a11P31650 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc6a11P31650 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc6a11P31650 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Slc6a11P31650 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc6a11P31650 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc6a11P31650 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc6a11P31650 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Slc6a11P31650 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
Slc6a11P31650 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc6a11P31650 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc6a11P31650 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc6a11P31650 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Slc6a11P31650 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc6a11P31650 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Slc6a11P31650 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc6a11P31650 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc6a11P31650 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc6a11P31650 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc6a11P31650 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc6a11P31650 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc6a11P31650 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Slc6a11P31650 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc6a11P31650 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC15.65■□□□□ 0.1
Slc6a11P31650 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc6a11P31650 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Slc6a11P31650 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc6a11P31650 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc6a11P31650 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc6a11P31650 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc6a11P31650 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc6a11P31650 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc6a11P31650 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc6a11P31650 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Slc6a11P31650 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc6a11P31650 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc6a11P31650 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC15.64■□□□□ 0.1
Slc6a11P31650 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC15.64■□□□□ 0.09
Slc6a11P31650 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms