Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf1bP25119 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Tnfrsf1bP25119 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf1bP25119 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf1bP25119 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf1bP25119 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf1bP25119 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf1bP25119 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Tnfrsf1bP25119 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Tnfrsf1bP25119 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf1bP25119 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC15.29■□□□□ 0.04
Tnfrsf1bP25119 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf1bP25119 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf1bP25119 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf1bP25119 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf1bP25119 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf1bP25119 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf1bP25119 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf1bP25119 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf1bP25119 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Tnfrsf1bP25119 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Tnfrsf1bP25119 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Tnfrsf1bP25119 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf1bP25119 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf1bP25119 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf1bP25119 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf1bP25119 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf1bP25119 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf1bP25119 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf1bP25119 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf1bP25119 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Tnfrsf1bP25119 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf1bP25119 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf1bP25119 Gm17808-201ENSMUST00000200859 894 ntBASIC15.28■□□□□ 0.04
Tnfrsf1bP25119 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC15.28■□□□□ 0.04
Tnfrsf1bP25119 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf1bP25119 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
Tnfrsf1bP25119 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf1bP25119 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Tnfrsf1bP25119 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf1bP25119 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf1bP25119 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf1bP25119 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC15.28■□□□□ 0.04
Tnfrsf1bP25119 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf1bP25119 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf1bP25119 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf1bP25119 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf1bP25119 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf1bP25119 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC15.27■□□□□ 0.04
Tnfrsf1bP25119 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC15.27■□□□□ 0.04
Tnfrsf1bP25119 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Tnfrsf1bP25119 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tnfrsf1bP25119 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tnfrsf1bP25119 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tnfrsf1bP25119 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Tnfrsf1bP25119 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tnfrsf1bP25119 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC15.27■□□□□ 0.04
Tnfrsf1bP25119 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tnfrsf1bP25119 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Tnfrsf1bP25119 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.04
Tnfrsf1bP25119 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Tnfrsf1bP25119 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC15.27■□□□□ 0.04
Tnfrsf1bP25119 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Tnfrsf1bP25119 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15.27■□□□□ 0.04
Tnfrsf1bP25119 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15.27■□□□□ 0.04
Tnfrsf1bP25119 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC15.27■□□□□ 0.04
Tnfrsf1bP25119 Gm29518-201ENSMUST00000190858 372 ntBASIC15.27■□□□□ 0.04
Tnfrsf1bP25119 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tnfrsf1bP25119 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Tnfrsf1bP25119 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tnfrsf1bP25119 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Tnfrsf1bP25119 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tnfrsf1bP25119 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tnfrsf1bP25119 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tnfrsf1bP25119 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tnfrsf1bP25119 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tnfrsf1bP25119 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Tnfrsf1bP25119 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tnfrsf1bP25119 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tnfrsf1bP25119 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tnfrsf1bP25119 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
Tnfrsf1bP25119 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf1bP25119 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf1bP25119 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC15.26■□□□□ 0.03
Tnfrsf1bP25119 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf1bP25119 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC15.26■□□□□ 0.03
Tnfrsf1bP25119 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC15.26■□□□□ 0.03
Tnfrsf1bP25119 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf1bP25119 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf1bP25119 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf1bP25119 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Tnfrsf1bP25119 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf1bP25119 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf1bP25119 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf1bP25119 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.26■□□□□ 0.03
Tnfrsf1bP25119 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf1bP25119 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf1bP25119 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf1bP25119 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf1bP25119 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms