Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BdnfP21237 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
BdnfP21237 Mir1199-201ENSMUST00000117015 119 ntBASIC15.82■□□□□ 0.12
BdnfP21237 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
BdnfP21237 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC15.82■□□□□ 0.12
BdnfP21237 Gm27000-201ENSMUST00000182943 842 ntBASIC15.82■□□□□ 0.12
BdnfP21237 AC175538.1-201ENSMUST00000225343 1269 ntBASIC15.82■□□□□ 0.12
BdnfP21237 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
BdnfP21237 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BdnfP21237 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
BdnfP21237 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
BdnfP21237 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BdnfP21237 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BdnfP21237 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.82■□□□□ 0.12
BdnfP21237 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
BdnfP21237 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BdnfP21237 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
BdnfP21237 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BdnfP21237 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BdnfP21237 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BdnfP21237 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BdnfP21237 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
BdnfP21237 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
BdnfP21237 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC15.81■□□□□ 0.12
BdnfP21237 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BdnfP21237 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
BdnfP21237 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
BdnfP21237 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BdnfP21237 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BdnfP21237 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
BdnfP21237 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BdnfP21237 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BdnfP21237 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BdnfP21237 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BdnfP21237 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
BdnfP21237 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
BdnfP21237 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BdnfP21237 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
BdnfP21237 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BdnfP21237 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BdnfP21237 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BdnfP21237 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BdnfP21237 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BdnfP21237 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
BdnfP21237 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
BdnfP21237 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
BdnfP21237 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC15.8■□□□□ 0.12
BdnfP21237 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
BdnfP21237 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BdnfP21237 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BdnfP21237 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
BdnfP21237 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
BdnfP21237 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BdnfP21237 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BdnfP21237 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.8■□□□□ 0.12
BdnfP21237 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.8■□□□□ 0.12
BdnfP21237 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
BdnfP21237 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BdnfP21237 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.79■□□□□ 0.12
BdnfP21237 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.79■□□□□ 0.12
BdnfP21237 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
BdnfP21237 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
BdnfP21237 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
BdnfP21237 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
BdnfP21237 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC15.79■□□□□ 0.12
BdnfP21237 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
BdnfP21237 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.79■□□□□ 0.12
BdnfP21237 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
BdnfP21237 Gm7638-201ENSMUST00000121348 967 ntBASIC15.79■□□□□ 0.12
BdnfP21237 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
BdnfP21237 Gm16042-201ENSMUST00000204813 1247 ntBASIC15.79■□□□□ 0.12
BdnfP21237 AC153881.1-201ENSMUST00000214448 284 ntBASIC15.79■□□□□ 0.12
BdnfP21237 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
BdnfP21237 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
BdnfP21237 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
BdnfP21237 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
BdnfP21237 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
BdnfP21237 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
BdnfP21237 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
BdnfP21237 Gm16011-201ENSMUST00000121567 2662 ntBASIC15.79■□□□□ 0.12
BdnfP21237 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
BdnfP21237 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.78■□□□□ 0.12
BdnfP21237 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
BdnfP21237 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
BdnfP21237 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.78■□□□□ 0.12
BdnfP21237 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
BdnfP21237 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
BdnfP21237 Gm38027-201ENSMUST00000192315 235 ntBASIC15.78■□□□□ 0.12
BdnfP21237 Gm5297-201ENSMUST00000198555 1171 ntBASIC15.78■□□□□ 0.12
BdnfP21237 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC15.78■□□□□ 0.12
BdnfP21237 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
BdnfP21237 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
BdnfP21237 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
BdnfP21237 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
BdnfP21237 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
BdnfP21237 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
BdnfP21237 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
BdnfP21237 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
BdnfP21237 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
BdnfP21237 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms