Protein–RNA interactions for Protein: P17919

Hoxb1, Homeobox protein Hox-B1, mousemouse

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb1P17919 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxb1P17919 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Hoxb1P17919 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxb1P17919 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Hoxb1P17919 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxb1P17919 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxb1P17919 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxb1P17919 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Hoxb1P17919 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxb1P17919 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxb1P17919 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxb1P17919 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC14.41□□□□□ -0.1
Hoxb1P17919 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC14.41□□□□□ -0.1
Hoxb1P17919 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC14.41□□□□□ -0.1
Hoxb1P17919 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxb1P17919 Gm9484-201ENSMUST00000195892 1159 ntBASIC14.41□□□□□ -0.1
Hoxb1P17919 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxb1P17919 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxb1P17919 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxb1P17919 AC154855.1-201ENSMUST00000227353 1458 ntBASIC14.41□□□□□ -0.1
Hoxb1P17919 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.41□□□□□ -0.1
Hoxb1P17919 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxb1P17919 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxb1P17919 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC14.41□□□□□ -0.1
Hoxb1P17919 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Hoxb1P17919 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxb1P17919 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxb1P17919 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxb1P17919 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxb1P17919 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxb1P17919 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxb1P17919 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxb1P17919 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxb1P17919 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxb1P17919 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxb1P17919 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxb1P17919 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxb1P17919 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC14.4□□□□□ -0.1
Hoxb1P17919 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Hoxb1P17919 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Hoxb1P17919 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxb1P17919 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Hoxb1P17919 Krtap5-1-202ENSMUST00000188274 742 ntBASIC14.4□□□□□ -0.1
Hoxb1P17919 Gm29994-201ENSMUST00000195495 1193 ntBASIC14.4□□□□□ -0.1
Hoxb1P17919 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxb1P17919 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxb1P17919 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Hoxb1P17919 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxb1P17919 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Hoxb1P17919 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxb1P17919 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxb1P17919 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxb1P17919 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxb1P17919 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxb1P17919 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Hoxb1P17919 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC14.39□□□□□ -0.11
Hoxb1P17919 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxb1P17919 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxb1P17919 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxb1P17919 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxb1P17919 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxb1P17919 Gm13836-201ENSMUST00000121159 501 ntBASIC14.39□□□□□ -0.11
Hoxb1P17919 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC14.39□□□□□ -0.11
Hoxb1P17919 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC14.39□□□□□ -0.11
Hoxb1P17919 Gm21814-202ENSMUST00000203277 873 ntBASIC14.39□□□□□ -0.11
Hoxb1P17919 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Hoxb1P17919 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC14.39□□□□□ -0.11
Hoxb1P17919 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Hoxb1P17919 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC14.39□□□□□ -0.11
Hoxb1P17919 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxb1P17919 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxb1P17919 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxb1P17919 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxb1P17919 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxb1P17919 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxb1P17919 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxb1P17919 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxb1P17919 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxb1P17919 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxb1P17919 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxb1P17919 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxb1P17919 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxb1P17919 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxb1P17919 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxb1P17919 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxb1P17919 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxb1P17919 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC14.38□□□□□ -0.11
Hoxb1P17919 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxb1P17919 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC14.38□□□□□ -0.11
Hoxb1P17919 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxb1P17919 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxb1P17919 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
Hoxb1P17919 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxb1P17919 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxb1P17919 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC14.38□□□□□ -0.11
Hoxb1P17919 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxb1P17919 Gm37055-201ENSMUST00000191866 133 ntBASIC14.38□□□□□ -0.11
Hoxb1P17919 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Hoxb1P17919 Gm3375-201ENSMUST00000203929 796 ntBASIC14.38□□□□□ -0.11
Hoxb1P17919 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms