Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Hoxc6P10629 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hoxc6P10629 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Hoxc6P10629 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hoxc6P10629 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hoxc6P10629 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Hoxc6P10629 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hoxc6P10629 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hoxc6P10629 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Hoxc6P10629 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hoxc6P10629 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC18.29■□□□□ 0.52
Hoxc6P10629 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC18.29■□□□□ 0.52
Hoxc6P10629 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC18.29■□□□□ 0.52
Hoxc6P10629 AV026068-213ENSMUST00000223675 1171 ntBASIC18.29■□□□□ 0.52
Hoxc6P10629 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC18.29■□□□□ 0.52
Hoxc6P10629 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hoxc6P10629 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.29■□□□□ 0.52
Hoxc6P10629 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hoxc6P10629 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Hoxc6P10629 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hoxc6P10629 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Hoxc6P10629 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hoxc6P10629 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.29■□□□□ 0.52
Hoxc6P10629 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Hoxc6P10629 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hoxc6P10629 Gm12497-201ENSMUST00000138778 237 ntBASIC18.28■□□□□ 0.52
Hoxc6P10629 Gm27702-201ENSMUST00000184512 56 ntBASIC18.28■□□□□ 0.52
Hoxc6P10629 Gm6089-201ENSMUST00000197666 938 ntBASIC18.28■□□□□ 0.52
Hoxc6P10629 CT943659.1-201ENSMUST00000215459 326 ntBASIC18.28■□□□□ 0.52
Hoxc6P10629 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC18.28■□□□□ 0.52
Hoxc6P10629 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Hoxc6P10629 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hoxc6P10629 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Hoxc6P10629 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hoxc6P10629 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hoxc6P10629 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hoxc6P10629 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hoxc6P10629 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hoxc6P10629 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hoxc6P10629 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hoxc6P10629 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hoxc6P10629 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC18.27■□□□□ 0.52
Hoxc6P10629 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC18.27■□□□□ 0.52
Hoxc6P10629 Gm15173-201ENSMUST00000122049 433 ntBASIC18.27■□□□□ 0.52
Hoxc6P10629 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
Hoxc6P10629 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hoxc6P10629 AC154222.1-201ENSMUST00000223882 475 ntBASIC18.27■□□□□ 0.52
Hoxc6P10629 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hoxc6P10629 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hoxc6P10629 Gm15590-201ENSMUST00000078419 552 ntBASIC18.27■□□□□ 0.52
Hoxc6P10629 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hoxc6P10629 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hoxc6P10629 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hoxc6P10629 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC18.27■□□□□ 0.52
Hoxc6P10629 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Hoxc6P10629 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Hoxc6P10629 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Hoxc6P10629 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Hoxc6P10629 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Hoxc6P10629 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Hoxc6P10629 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Hoxc6P10629 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Hoxc6P10629 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hoxc6P10629 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hoxc6P10629 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hoxc6P10629 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Hoxc6P10629 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hoxc6P10629 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Hoxc6P10629 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Hoxc6P10629 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Hoxc6P10629 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Hoxc6P10629 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hoxc6P10629 Gm2756-201ENSMUST00000195851 400 ntBASIC18.26■□□□□ 0.51
Hoxc6P10629 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hoxc6P10629 AC154757.1-201ENSMUST00000228289 336 ntBASIC18.26■□□□□ 0.51
Hoxc6P10629 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hoxc6P10629 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Hoxc6P10629 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hoxc6P10629 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hoxc6P10629 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
Hoxc6P10629 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hoxc6P10629 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.26■□□□□ 0.51
Hoxc6P10629 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hoxc6P10629 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Hoxc6P10629 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Hoxc6P10629 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hoxc6P10629 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hoxc6P10629 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hoxc6P10629 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hoxc6P10629 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Hoxc6P10629 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC18.25■□□□□ 0.51
Hoxc6P10629 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC18.25■□□□□ 0.51
Hoxc6P10629 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC18.25■□□□□ 0.51
Hoxc6P10629 Gm11780-201ENSMUST00000136880 516 ntBASIC18.25■□□□□ 0.51
Hoxc6P10629 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Hoxc6P10629 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Hoxc6P10629 Gm6736-201ENSMUST00000166583 948 ntBASIC18.25■□□□□ 0.51
Hoxc6P10629 Gm8349-201ENSMUST00000182720 1003 ntBASIC18.25■□□□□ 0.51
Hoxc6P10629 Gm6550-201ENSMUST00000187574 993 ntBASIC18.25■□□□□ 0.51
Hoxc6P10629 Gm43935-201ENSMUST00000203569 1050 ntBASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms