Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chmp6P0C0A3 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Chmp6P0C0A3 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chmp6P0C0A3 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chmp6P0C0A3 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Chmp6P0C0A3 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chmp6P0C0A3 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.97■□□□□ 0.47
Chmp6P0C0A3 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chmp6P0C0A3 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chmp6P0C0A3 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chmp6P0C0A3 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chmp6P0C0A3 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chmp6P0C0A3 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Chmp6P0C0A3 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chmp6P0C0A3 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chmp6P0C0A3 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.96■□□□□ 0.47
Chmp6P0C0A3 Mir1668-201ENSMUST00000184114 107 ntBASIC17.96■□□□□ 0.47
Chmp6P0C0A3 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Chmp6P0C0A3 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chmp6P0C0A3 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.96■□□□□ 0.47
Chmp6P0C0A3 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Chmp6P0C0A3 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chmp6P0C0A3 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chmp6P0C0A3 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Chmp6P0C0A3 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Chmp6P0C0A3 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Chmp6P0C0A3 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chmp6P0C0A3 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chmp6P0C0A3 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chmp6P0C0A3 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chmp6P0C0A3 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.95■□□□□ 0.46
Chmp6P0C0A3 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chmp6P0C0A3 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chmp6P0C0A3 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.95■□□□□ 0.46
Chmp6P0C0A3 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Chmp6P0C0A3 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Chmp6P0C0A3 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chmp6P0C0A3 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chmp6P0C0A3 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Chmp6P0C0A3 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chmp6P0C0A3 Dancr-204ENSMUST00000132389 2347 ntBASIC17.95■□□□□ 0.46
Chmp6P0C0A3 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chmp6P0C0A3 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.95■□□□□ 0.46
Chmp6P0C0A3 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Chmp6P0C0A3 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chmp6P0C0A3 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chmp6P0C0A3 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Chmp6P0C0A3 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chmp6P0C0A3 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Chmp6P0C0A3 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Chmp6P0C0A3 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chmp6P0C0A3 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.94■□□□□ 0.46
Chmp6P0C0A3 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Chmp6P0C0A3 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chmp6P0C0A3 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chmp6P0C0A3 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.94■□□□□ 0.46
Chmp6P0C0A3 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.94■□□□□ 0.46
Chmp6P0C0A3 Gm21559-201ENSMUST00000220638 855 ntBASIC17.94■□□□□ 0.46
Chmp6P0C0A3 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chmp6P0C0A3 Gm8587-201ENSMUST00000076538 843 ntBASIC17.94■□□□□ 0.46
Chmp6P0C0A3 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Chmp6P0C0A3 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chmp6P0C0A3 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chmp6P0C0A3 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chmp6P0C0A3 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chmp6P0C0A3 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chmp6P0C0A3 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.94■□□□□ 0.46
Chmp6P0C0A3 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chmp6P0C0A3 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Chmp6P0C0A3 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Chmp6P0C0A3 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chmp6P0C0A3 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp6P0C0A3 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.93■□□□□ 0.46
Chmp6P0C0A3 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Chmp6P0C0A3 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp6P0C0A3 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp6P0C0A3 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp6P0C0A3 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.93■□□□□ 0.46
Chmp6P0C0A3 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp6P0C0A3 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp6P0C0A3 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp6P0C0A3 Gm26039-201ENSMUST00000158152 144 ntBASIC17.93■□□□□ 0.46
Chmp6P0C0A3 Gm7977-201ENSMUST00000193787 748 ntBASIC17.93■□□□□ 0.46
Chmp6P0C0A3 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp6P0C0A3 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp6P0C0A3 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp6P0C0A3 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp6P0C0A3 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp6P0C0A3 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp6P0C0A3 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Chmp6P0C0A3 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Chmp6P0C0A3 Actl10-202ENSMUST00000226583 1501 ntBASIC17.93■□□□□ 0.46
Chmp6P0C0A3 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Chmp6P0C0A3 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp6P0C0A3 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.92■□□□□ 0.46
Chmp6P0C0A3 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp6P0C0A3 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp6P0C0A3 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp6P0C0A3 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.92■□□□□ 0.46
Chmp6P0C0A3 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms