Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hoxc8P09025 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hoxc8P09025 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.55■□□□□ 0.4
Hoxc8P09025 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hoxc8P09025 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hoxc8P09025 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hoxc8P09025 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hoxc8P09025 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hoxc8P09025 Gm5264-201ENSMUST00000190584 848 ntBASIC17.55■□□□□ 0.4
Hoxc8P09025 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hoxc8P09025 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC17.55■□□□□ 0.4
Hoxc8P09025 AC159093.1-201ENSMUST00000227779 380 ntBASIC17.55■□□□□ 0.4
Hoxc8P09025 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hoxc8P09025 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hoxc8P09025 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hoxc8P09025 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Hoxc8P09025 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hoxc8P09025 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hoxc8P09025 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hoxc8P09025 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hoxc8P09025 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.55■□□□□ 0.4
Hoxc8P09025 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hoxc8P09025 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hoxc8P09025 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC17.54■□□□□ 0.4
Hoxc8P09025 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hoxc8P09025 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hoxc8P09025 Gm3928-201ENSMUST00000121141 1307 ntBASIC17.54■□□□□ 0.4
Hoxc8P09025 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.54■□□□□ 0.4
Hoxc8P09025 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hoxc8P09025 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hoxc8P09025 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC17.54■□□□□ 0.4
Hoxc8P09025 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Hoxc8P09025 Gm27628-201ENSMUST00000184911 107 ntBASIC17.54■□□□□ 0.4
Hoxc8P09025 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC17.54■□□□□ 0.4
Hoxc8P09025 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC17.54■□□□□ 0.4
Hoxc8P09025 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.54■□□□□ 0.4
Hoxc8P09025 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hoxc8P09025 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Hoxc8P09025 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hoxc8P09025 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hoxc8P09025 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hoxc8P09025 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hoxc8P09025 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hoxc8P09025 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hoxc8P09025 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hoxc8P09025 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Hoxc8P09025 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hoxc8P09025 Gm15467-201ENSMUST00000120582 445 ntBASIC17.53■□□□□ 0.4
Hoxc8P09025 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC17.53■□□□□ 0.4
Hoxc8P09025 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hoxc8P09025 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hoxc8P09025 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hoxc8P09025 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hoxc8P09025 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hoxc8P09025 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hoxc8P09025 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hoxc8P09025 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hoxc8P09025 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.53■□□□□ 0.4
Hoxc8P09025 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.53■□□□□ 0.4
Hoxc8P09025 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hoxc8P09025 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hoxc8P09025 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC17.52■□□□□ 0.4
Hoxc8P09025 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hoxc8P09025 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hoxc8P09025 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hoxc8P09025 Gm7222-201ENSMUST00000117512 906 ntBASIC17.52■□□□□ 0.4
Hoxc8P09025 Gm14140-201ENSMUST00000119999 995 ntBASIC17.52■□□□□ 0.4
Hoxc8P09025 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC17.52■□□□□ 0.4
Hoxc8P09025 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Hoxc8P09025 Gm43935-201ENSMUST00000203569 1050 ntBASIC17.52■□□□□ 0.4
Hoxc8P09025 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC17.52■□□□□ 0.4
Hoxc8P09025 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC17.52■□□□□ 0.4
Hoxc8P09025 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Hoxc8P09025 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hoxc8P09025 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hoxc8P09025 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Hoxc8P09025 Gm37500-201ENSMUST00000192059 1443 ntBASIC17.52■□□□□ 0.4
Hoxc8P09025 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Hoxc8P09025 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Hoxc8P09025 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC17.52■□□□□ 0.39
Hoxc8P09025 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hoxc8P09025 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hoxc8P09025 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hoxc8P09025 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hoxc8P09025 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC17.51■□□□□ 0.39
Hoxc8P09025 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Hoxc8P09025 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Hoxc8P09025 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Hoxc8P09025 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC17.51■□□□□ 0.39
Hoxc8P09025 Gm11594-201ENSMUST00000122313 162 ntBASIC17.51■□□□□ 0.39
Hoxc8P09025 Gm25925-201ENSMUST00000158314 306 ntBASIC17.51■□□□□ 0.39
Hoxc8P09025 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hoxc8P09025 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hoxc8P09025 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC17.51■□□□□ 0.39
Hoxc8P09025 AC159106.1-201ENSMUST00000224421 690 ntBASIC17.51■□□□□ 0.39
Hoxc8P09025 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hoxc8P09025 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Hoxc8P09025 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Hoxc8P09025 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hoxc8P09025 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms