Protein–RNA interactions for Protein: P03980

Ig heavy chain V region TEPC 1017, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P03980 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
P03980 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
P03980 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
P03980 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
P03980 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
P03980 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
P03980 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P03980 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
P03980 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
P03980 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
P03980 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P03980 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
P03980 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
P03980 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P03980 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
P03980 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
P03980 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
P03980 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P03980 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
P03980 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
P03980 Gm45203-201ENSMUST00000206384 1831 ntBASIC12.78□□□□□ -0.36
P03980 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
P03980 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
P03980 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC12.78□□□□□ -0.36
P03980 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
P03980 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
P03980 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
P03980 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC12.78□□□□□ -0.36
P03980 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC12.78□□□□□ -0.36
P03980 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC12.78□□□□□ -0.36
P03980 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
P03980 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC12.78□□□□□ -0.36
P03980 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
P03980 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC12.78□□□□□ -0.36
P03980 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
P03980 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC12.78□□□□□ -0.36
P03980 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
P03980 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
P03980 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
P03980 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
P03980 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
P03980 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
P03980 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
P03980 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC12.78□□□□□ -0.36
P03980 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
P03980 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
P03980 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
P03980 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
P03980 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
P03980 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
P03980 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
P03980 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
P03980 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
P03980 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
P03980 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
P03980 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
P03980 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.36
P03980 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
P03980 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
P03980 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
P03980 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
P03980 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
P03980 Gm27275-201ENSMUST00000184318 272 ntBASIC12.77□□□□□ -0.37
P03980 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC12.77□□□□□ -0.37
P03980 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
P03980 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
P03980 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.37
P03980 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
P03980 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
P03980 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC12.77□□□□□ -0.37
P03980 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
P03980 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
P03980 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
P03980 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
P03980 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
P03980 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
P03980 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
P03980 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC12.76□□□□□ -0.37
P03980 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
P03980 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC12.76□□□□□ -0.37
P03980 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
P03980 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
P03980 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC12.76□□□□□ -0.37
P03980 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
P03980 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
P03980 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC12.76□□□□□ -0.37
P03980 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
P03980 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
P03980 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
P03980 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
P03980 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
P03980 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
P03980 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
P03980 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
P03980 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
P03980 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
P03980 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
P03980 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
P03980 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
P03980 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms