Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxa3P02831 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxa3P02831 Gm6623-201ENSMUST00000173570 544 ntBASIC13.84□□□□□ -0.19
Hoxa3P02831 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
Hoxa3P02831 AC130713.1-201ENSMUST00000228853 1096 ntBASIC13.84□□□□□ -0.19
Hoxa3P02831 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxa3P02831 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxa3P02831 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Hoxa3P02831 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Hoxa3P02831 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxa3P02831 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxa3P02831 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxa3P02831 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxa3P02831 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxa3P02831 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxa3P02831 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxa3P02831 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxa3P02831 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxa3P02831 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxa3P02831 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Hoxa3P02831 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Hoxa3P02831 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Hoxa3P02831 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.19
Hoxa3P02831 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Hoxa3P02831 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Hoxa3P02831 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
Hoxa3P02831 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxa3P02831 Wnt10b-204ENSMUST00000226655 1807 ntBASIC13.83□□□□□ -0.2
Hoxa3P02831 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxa3P02831 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxa3P02831 Gm45774-201ENSMUST00000211992 2665 ntBASIC13.83□□□□□ -0.2
Hoxa3P02831 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxa3P02831 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxa3P02831 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Hoxa3P02831 Gm13186-201ENSMUST00000118031 316 ntBASIC13.83□□□□□ -0.2
Hoxa3P02831 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxa3P02831 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC13.83□□□□□ -0.2
Hoxa3P02831 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Hoxa3P02831 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxa3P02831 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxa3P02831 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxa3P02831 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxa3P02831 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC13.83□□□□□ -0.2
Hoxa3P02831 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxa3P02831 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Hoxa3P02831 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxa3P02831 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Hoxa3P02831 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxa3P02831 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxa3P02831 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxa3P02831 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxa3P02831 Phf7-203ENSMUST00000226565 1971 ntBASIC13.82□□□□□ -0.2
Hoxa3P02831 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Hoxa3P02831 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxa3P02831 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxa3P02831 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxa3P02831 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Hoxa3P02831 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxa3P02831 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Hoxa3P02831 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Hoxa3P02831 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxa3P02831 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC13.81□□□□□ -0.2
Hoxa3P02831 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC13.81□□□□□ -0.2
Hoxa3P02831 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC13.81□□□□□ -0.2
Hoxa3P02831 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxa3P02831 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxa3P02831 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxa3P02831 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxa3P02831 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxa3P02831 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxa3P02831 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxa3P02831 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxa3P02831 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxa3P02831 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxa3P02831 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxa3P02831 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxa3P02831 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC13.81□□□□□ -0.2
Hoxa3P02831 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC13.81□□□□□ -0.2
Hoxa3P02831 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxa3P02831 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxa3P02831 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC13.81□□□□□ -0.2
Hoxa3P02831 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxa3P02831 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxa3P02831 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxa3P02831 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxa3P02831 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxa3P02831 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxa3P02831 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxa3P02831 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxa3P02831 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Hoxa3P02831 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxa3P02831 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxa3P02831 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxa3P02831 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Hoxa3P02831 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxa3P02831 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxa3P02831 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC13.8□□□□□ -0.2
Hoxa3P02831 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxa3P02831 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxa3P02831 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms