Protein–RNA interactions for Protein: O88632

Sema3f, Semaphorin-3F, mousemouse

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sema3fO88632 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Sema3fO88632 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Sema3fO88632 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.97■□□□□ 0.63
Sema3fO88632 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sema3fO88632 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sema3fO88632 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sema3fO88632 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sema3fO88632 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Sema3fO88632 Mir8098-201ENSMUST00000184011 137 ntBASIC18.97■□□□□ 0.63
Sema3fO88632 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC18.97■□□□□ 0.63
Sema3fO88632 Gm28659-201ENSMUST00000188013 759 ntBASIC18.97■□□□□ 0.63
Sema3fO88632 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC18.97■□□□□ 0.63
Sema3fO88632 AC159301.1-201ENSMUST00000225130 1182 ntBASIC18.97■□□□□ 0.63
Sema3fO88632 Cmtm5-203ENSMUST00000227441 610 ntBASIC18.97■□□□□ 0.63
Sema3fO88632 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sema3fO88632 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Sema3fO88632 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sema3fO88632 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sema3fO88632 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sema3fO88632 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Sema3fO88632 Gm8839-201ENSMUST00000121279 1645 ntBASIC18.96■□□□□ 0.63
Sema3fO88632 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sema3fO88632 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sema3fO88632 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sema3fO88632 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Sema3fO88632 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sema3fO88632 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC18.96■□□□□ 0.63
Sema3fO88632 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC18.96■□□□□ 0.63
Sema3fO88632 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sema3fO88632 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
Sema3fO88632 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sema3fO88632 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sema3fO88632 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sema3fO88632 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sema3fO88632 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sema3fO88632 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sema3fO88632 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Sema3fO88632 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sema3fO88632 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sema3fO88632 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sema3fO88632 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sema3fO88632 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Sema3fO88632 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sema3fO88632 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Sema3fO88632 Gm15165-201ENSMUST00000118140 502 ntBASIC18.95■□□□□ 0.62
Sema3fO88632 Gm11452-201ENSMUST00000122376 690 ntBASIC18.95■□□□□ 0.62
Sema3fO88632 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Sema3fO88632 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Sema3fO88632 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Sema3fO88632 Gm44454-201ENSMUST00000198541 138 ntBASIC18.95■□□□□ 0.62
Sema3fO88632 AC160338.1-201ENSMUST00000214232 705 ntBASIC18.95■□□□□ 0.62
Sema3fO88632 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Sema3fO88632 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.95■□□□□ 0.62
Sema3fO88632 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Sema3fO88632 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sema3fO88632 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Sema3fO88632 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Sema3fO88632 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sema3fO88632 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sema3fO88632 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Sema3fO88632 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sema3fO88632 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sema3fO88632 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Sema3fO88632 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sema3fO88632 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Sema3fO88632 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
Sema3fO88632 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC18.94■□□□□ 0.62
Sema3fO88632 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC18.94■□□□□ 0.62
Sema3fO88632 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Sema3fO88632 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sema3fO88632 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sema3fO88632 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Sema3fO88632 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sema3fO88632 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sema3fO88632 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sema3fO88632 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sema3fO88632 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC18.93■□□□□ 0.62
Sema3fO88632 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Sema3fO88632 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sema3fO88632 Gm44357-201ENSMUST00000195897 142 ntBASIC18.93■□□□□ 0.62
Sema3fO88632 Gm19658-201ENSMUST00000196231 138 ntBASIC18.93■□□□□ 0.62
Sema3fO88632 Gm44367-201ENSMUST00000196836 138 ntBASIC18.93■□□□□ 0.62
Sema3fO88632 Gm44350-201ENSMUST00000197197 138 ntBASIC18.93■□□□□ 0.62
Sema3fO88632 Gm44390-201ENSMUST00000197533 144 ntBASIC18.93■□□□□ 0.62
Sema3fO88632 Gm44313-201ENSMUST00000198018 138 ntBASIC18.93■□□□□ 0.62
Sema3fO88632 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Sema3fO88632 Gm44486-201ENSMUST00000198508 138 ntBASIC18.93■□□□□ 0.62
Sema3fO88632 Gm44314-201ENSMUST00000199263 138 ntBASIC18.93■□□□□ 0.62
Sema3fO88632 Gm44394-201ENSMUST00000199558 138 ntBASIC18.93■□□□□ 0.62
Sema3fO88632 Gm44484-201ENSMUST00000199873 138 ntBASIC18.93■□□□□ 0.62
Sema3fO88632 Gm44466-201ENSMUST00000200264 138 ntBASIC18.93■□□□□ 0.62
Sema3fO88632 Gm44359-201ENSMUST00000200671 138 ntBASIC18.93■□□□□ 0.62
Sema3fO88632 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
Sema3fO88632 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sema3fO88632 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sema3fO88632 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sema3fO88632 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sema3fO88632 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sema3fO88632 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Sema3fO88632 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms