Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pdlim3O70209 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pdlim3O70209 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pdlim3O70209 Gm45203-201ENSMUST00000206384 1831 ntBASIC14.99□□□□□ -0.01
Pdlim3O70209 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Pdlim3O70209 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pdlim3O70209 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pdlim3O70209 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pdlim3O70209 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.99□□□□□ -0.01
Pdlim3O70209 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pdlim3O70209 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pdlim3O70209 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pdlim3O70209 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pdlim3O70209 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC14.99□□□□□ -0.01
Pdlim3O70209 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC14.99□□□□□ -0.01
Pdlim3O70209 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pdlim3O70209 Gm9731-201ENSMUST00000209480 747 ntBASIC14.99□□□□□ -0.01
Pdlim3O70209 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pdlim3O70209 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pdlim3O70209 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pdlim3O70209 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pdlim3O70209 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pdlim3O70209 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Pdlim3O70209 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pdlim3O70209 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pdlim3O70209 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pdlim3O70209 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Pdlim3O70209 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pdlim3O70209 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pdlim3O70209 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pdlim3O70209 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pdlim3O70209 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pdlim3O70209 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pdlim3O70209 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pdlim3O70209 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pdlim3O70209 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.98□□□□□ -0.01
Pdlim3O70209 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pdlim3O70209 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC14.98□□□□□ -0.01
Pdlim3O70209 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pdlim3O70209 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Pdlim3O70209 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC14.98□□□□□ -0.01
Pdlim3O70209 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC14.98□□□□□ -0.01
Pdlim3O70209 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pdlim3O70209 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pdlim3O70209 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pdlim3O70209 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pdlim3O70209 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.97□□□□□ -0.01
Pdlim3O70209 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pdlim3O70209 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pdlim3O70209 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.97□□□□□ -0.01
Pdlim3O70209 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Pdlim3O70209 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pdlim3O70209 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pdlim3O70209 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pdlim3O70209 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC14.97□□□□□ -0.01
Pdlim3O70209 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC14.97□□□□□ -0.01
Pdlim3O70209 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pdlim3O70209 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pdlim3O70209 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pdlim3O70209 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pdlim3O70209 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Pdlim3O70209 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Pdlim3O70209 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pdlim3O70209 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pdlim3O70209 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pdlim3O70209 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Pdlim3O70209 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Pdlim3O70209 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pdlim3O70209 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Pdlim3O70209 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pdlim3O70209 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pdlim3O70209 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pdlim3O70209 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pdlim3O70209 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
Pdlim3O70209 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pdlim3O70209 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pdlim3O70209 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Pdlim3O70209 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.96□□□□□ -0.01
Pdlim3O70209 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pdlim3O70209 Gm20049-201ENSMUST00000219950 730 ntBASIC14.96□□□□□ -0.01
Pdlim3O70209 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pdlim3O70209 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pdlim3O70209 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pdlim3O70209 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pdlim3O70209 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pdlim3O70209 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pdlim3O70209 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.96□□□□□ -0.01
Pdlim3O70209 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pdlim3O70209 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pdlim3O70209 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Pdlim3O70209 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Pdlim3O70209 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Pdlim3O70209 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pdlim3O70209 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pdlim3O70209 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pdlim3O70209 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pdlim3O70209 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
Pdlim3O70209 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pdlim3O70209 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pdlim3O70209 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms