Protein–RNA interactions for Protein: O55242

Sigmar1, Sigma non-opioid intracellular receptor 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sigmar1O55242 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sigmar1O55242 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sigmar1O55242 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sigmar1O55242 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Sigmar1O55242 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sigmar1O55242 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sigmar1O55242 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Sigmar1O55242 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Sigmar1O55242 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sigmar1O55242 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sigmar1O55242 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Sigmar1O55242 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sigmar1O55242 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sigmar1O55242 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Sigmar1O55242 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sigmar1O55242 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sigmar1O55242 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Sigmar1O55242 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC11.46□□□□□ -0.57
Sigmar1O55242 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sigmar1O55242 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.46□□□□□ -0.57
Sigmar1O55242 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sigmar1O55242 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sigmar1O55242 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Sigmar1O55242 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sigmar1O55242 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sigmar1O55242 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Sigmar1O55242 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.57
Sigmar1O55242 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC11.46□□□□□ -0.57
Sigmar1O55242 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC11.46□□□□□ -0.57
Sigmar1O55242 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sigmar1O55242 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sigmar1O55242 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sigmar1O55242 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Sigmar1O55242 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Sigmar1O55242 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sigmar1O55242 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
Sigmar1O55242 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sigmar1O55242 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sigmar1O55242 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.58
Sigmar1O55242 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sigmar1O55242 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sigmar1O55242 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sigmar1O55242 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC11.46□□□□□ -0.58
Sigmar1O55242 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
Sigmar1O55242 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Sigmar1O55242 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Sigmar1O55242 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Sigmar1O55242 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Sigmar1O55242 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sigmar1O55242 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sigmar1O55242 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Sigmar1O55242 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sigmar1O55242 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sigmar1O55242 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sigmar1O55242 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sigmar1O55242 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Sigmar1O55242 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sigmar1O55242 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Sigmar1O55242 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Sigmar1O55242 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sigmar1O55242 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Sigmar1O55242 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sigmar1O55242 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC11.45□□□□□ -0.58
Sigmar1O55242 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Sigmar1O55242 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sigmar1O55242 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sigmar1O55242 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sigmar1O55242 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Sigmar1O55242 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Sigmar1O55242 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC11.45□□□□□ -0.58
Sigmar1O55242 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sigmar1O55242 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sigmar1O55242 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Sigmar1O55242 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
Sigmar1O55242 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sigmar1O55242 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sigmar1O55242 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sigmar1O55242 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sigmar1O55242 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Sigmar1O55242 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sigmar1O55242 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sigmar1O55242 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Sigmar1O55242 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sigmar1O55242 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sigmar1O55242 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Sigmar1O55242 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
Sigmar1O55242 Gm7860-201ENSMUST00000121190 879 ntBASIC11.44□□□□□ -0.58
Sigmar1O55242 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC11.44□□□□□ -0.58
Sigmar1O55242 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC11.44□□□□□ -0.58
Sigmar1O55242 Mir6538-201ENSMUST00000183713 110 ntBASIC11.44□□□□□ -0.58
Sigmar1O55242 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC11.44□□□□□ -0.58
Sigmar1O55242 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Sigmar1O55242 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC11.44□□□□□ -0.58
Sigmar1O55242 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Sigmar1O55242 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC11.44□□□□□ -0.58
Sigmar1O55242 Gm10209-201ENSMUST00000203397 1607 ntBASIC11.44□□□□□ -0.58
Sigmar1O55242 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sigmar1O55242 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Sigmar1O55242 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sigmar1O55242 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms