Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC13.94□□□□□ -0.18
Cxcl13O55038 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cxcl13O55038 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cxcl13O55038 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cxcl13O55038 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
Cxcl13O55038 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cxcl13O55038 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Cxcl13O55038 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cxcl13O55038 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cxcl13O55038 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Cxcl13O55038 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cxcl13O55038 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cxcl13O55038 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cxcl13O55038 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC13.93□□□□□ -0.18
Cxcl13O55038 Gm12644-201ENSMUST00000119935 606 ntBASIC13.93□□□□□ -0.18
Cxcl13O55038 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC13.93□□□□□ -0.18
Cxcl13O55038 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC13.93□□□□□ -0.18
Cxcl13O55038 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC13.93□□□□□ -0.18
Cxcl13O55038 Gm28659-201ENSMUST00000188013 759 ntBASIC13.93□□□□□ -0.18
Cxcl13O55038 Slc35b2-202ENSMUST00000223987 1766 ntBASIC13.93□□□□□ -0.18
Cxcl13O55038 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cxcl13O55038 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cxcl13O55038 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cxcl13O55038 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cxcl13O55038 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cxcl13O55038 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC13.93□□□□□ -0.18
Cxcl13O55038 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cxcl13O55038 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cxcl13O55038 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cxcl13O55038 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cxcl13O55038 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cxcl13O55038 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cxcl13O55038 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cxcl13O55038 Gm15165-201ENSMUST00000118140 502 ntBASIC13.92□□□□□ -0.18
Cxcl13O55038 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC13.92□□□□□ -0.18
Cxcl13O55038 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC13.92□□□□□ -0.18
Cxcl13O55038 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC13.92□□□□□ -0.18
Cxcl13O55038 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cxcl13O55038 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC13.92□□□□□ -0.18
Cxcl13O55038 Gm44454-201ENSMUST00000198541 138 ntBASIC13.92□□□□□ -0.18
Cxcl13O55038 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC13.92□□□□□ -0.18
Cxcl13O55038 AC133598.3-202ENSMUST00000224219 531 ntBASIC13.92□□□□□ -0.18
Cxcl13O55038 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cxcl13O55038 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cxcl13O55038 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cxcl13O55038 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cxcl13O55038 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cxcl13O55038 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cxcl13O55038 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
Cxcl13O55038 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cxcl13O55038 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cxcl13O55038 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cxcl13O55038 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC13.91□□□□□ -0.18
Cxcl13O55038 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cxcl13O55038 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cxcl13O55038 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cxcl13O55038 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC13.91□□□□□ -0.18
Cxcl13O55038 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cxcl13O55038 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cxcl13O55038 Gm16401-202ENSMUST00000197463 2074 ntBASIC13.91□□□□□ -0.18
Cxcl13O55038 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cxcl13O55038 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cxcl13O55038 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC13.91□□□□□ -0.18
Cxcl13O55038 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cxcl13O55038 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cxcl13O55038 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cxcl13O55038 Mir8098-201ENSMUST00000184011 137 ntBASIC13.91□□□□□ -0.18
Cxcl13O55038 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC13.91□□□□□ -0.18
Cxcl13O55038 Gm5864-201ENSMUST00000202263 970 ntBASIC13.91□□□□□ -0.18
Cxcl13O55038 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC13.91□□□□□ -0.18
Cxcl13O55038 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cxcl13O55038 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cxcl13O55038 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cxcl13O55038 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Cxcl13O55038 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cxcl13O55038 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cxcl13O55038 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cxcl13O55038 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cxcl13O55038 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cxcl13O55038 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cxcl13O55038 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cxcl13O55038 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cxcl13O55038 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cxcl13O55038 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cxcl13O55038 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cxcl13O55038 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cxcl13O55038 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC13.9□□□□□ -0.18
Cxcl13O55038 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cxcl13O55038 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cxcl13O55038 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cxcl13O55038 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC13.9□□□□□ -0.18
Cxcl13O55038 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC13.9□□□□□ -0.18
Cxcl13O55038 Gm27867-201ENSMUST00000184778 125 ntBASIC13.9□□□□□ -0.18
Cxcl13O55038 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Cxcl13O55038 AC164629.2-201ENSMUST00000217916 270 ntBASIC13.9□□□□□ -0.18
Cxcl13O55038 CT009713.7-201ENSMUST00000224689 571 ntBASIC13.9□□□□□ -0.18
Cxcl13O55038 Cmtm5-203ENSMUST00000227441 610 ntBASIC13.9□□□□□ -0.18
Cxcl13O55038 AC114585.2-202ENSMUST00000228094 426 ntBASIC13.9□□□□□ -0.18
Cxcl13O55038 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cxcl13O55038 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms