Protein–RNA interactions for Protein: O55029

Copb2, Coatomer subunit beta', mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb2O55029 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC18.93■□□□□ 0.62
Copb2O55029 Gm27459-201ENSMUST00000184860 107 ntBASIC18.93■□□□□ 0.62
Copb2O55029 Gm43347-201ENSMUST00000200226 580 ntBASIC18.93■□□□□ 0.62
Copb2O55029 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC18.93■□□□□ 0.62
Copb2O55029 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
Copb2O55029 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Copb2O55029 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Copb2O55029 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Copb2O55029 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Copb2O55029 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Copb2O55029 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
Copb2O55029 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Copb2O55029 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Copb2O55029 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Copb2O55029 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Copb2O55029 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Copb2O55029 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Copb2O55029 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Copb2O55029 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Copb2O55029 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Copb2O55029 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Copb2O55029 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Copb2O55029 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Copb2O55029 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC18.92■□□□□ 0.62
Copb2O55029 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Copb2O55029 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Copb2O55029 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Copb2O55029 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Copb2O55029 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Copb2O55029 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.92■□□□□ 0.62
Copb2O55029 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Copb2O55029 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Copb2O55029 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Copb2O55029 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Copb2O55029 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Copb2O55029 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Copb2O55029 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Copb2O55029 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC18.91■□□□□ 0.62
Copb2O55029 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Copb2O55029 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Copb2O55029 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Copb2O55029 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Copb2O55029 Gm44430-201ENSMUST00000203376 995 ntBASIC18.91■□□□□ 0.62
Copb2O55029 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC18.91■□□□□ 0.62
Copb2O55029 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Copb2O55029 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Copb2O55029 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Copb2O55029 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Copb2O55029 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Copb2O55029 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC18.91■□□□□ 0.62
Copb2O55029 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Copb2O55029 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Copb2O55029 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC18.9■□□□□ 0.62
Copb2O55029 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Copb2O55029 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC18.9■□□□□ 0.62
Copb2O55029 Gm5864-201ENSMUST00000202263 970 ntBASIC18.9■□□□□ 0.62
Copb2O55029 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Copb2O55029 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Copb2O55029 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Copb2O55029 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Copb2O55029 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Copb2O55029 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Copb2O55029 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Copb2O55029 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
Copb2O55029 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC18.89■□□□□ 0.61
Copb2O55029 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Copb2O55029 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Copb2O55029 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Copb2O55029 Gm13312-201ENSMUST00000119631 718 ntBASIC18.89■□□□□ 0.61
Copb2O55029 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Copb2O55029 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC18.89■□□□□ 0.61
Copb2O55029 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC18.89■□□□□ 0.61
Copb2O55029 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Copb2O55029 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Copb2O55029 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Copb2O55029 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Copb2O55029 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Copb2O55029 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Copb2O55029 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC18.88■□□□□ 0.61
Copb2O55029 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Copb2O55029 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Copb2O55029 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.88■□□□□ 0.61
Copb2O55029 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Copb2O55029 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Copb2O55029 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Copb2O55029 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Copb2O55029 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Copb2O55029 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC18.88■□□□□ 0.61
Copb2O55029 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Copb2O55029 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Copb2O55029 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Copb2O55029 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Copb2O55029 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Copb2O55029 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
Copb2O55029 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Copb2O55029 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC18.88■□□□□ 0.61
Copb2O55029 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Copb2O55029 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Copb2O55029 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Copb2O55029 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms