Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cldn5O54942 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cldn5O54942 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cldn5O54942 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cldn5O54942 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Cldn5O54942 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cldn5O54942 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cldn5O54942 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cldn5O54942 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Cldn5O54942 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.1■□□□□ 0.33
Cldn5O54942 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cldn5O54942 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cldn5O54942 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cldn5O54942 Gm13216-201ENSMUST00000117145 591 ntBASIC17.1■□□□□ 0.33
Cldn5O54942 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC17.1■□□□□ 0.33
Cldn5O54942 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cldn5O54942 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cldn5O54942 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cldn5O54942 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cldn5O54942 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cldn5O54942 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cldn5O54942 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Cldn5O54942 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cldn5O54942 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cldn5O54942 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cldn5O54942 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cldn5O54942 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cldn5O54942 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cldn5O54942 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cldn5O54942 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cldn5O54942 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cldn5O54942 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cldn5O54942 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cldn5O54942 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cldn5O54942 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.09■□□□□ 0.33
Cldn5O54942 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC17.09■□□□□ 0.33
Cldn5O54942 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.09■□□□□ 0.33
Cldn5O54942 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cldn5O54942 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.09■□□□□ 0.33
Cldn5O54942 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Cldn5O54942 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
Cldn5O54942 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cldn5O54942 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cldn5O54942 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cldn5O54942 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cldn5O54942 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cldn5O54942 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.09■□□□□ 0.33
Cldn5O54942 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cldn5O54942 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cldn5O54942 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cldn5O54942 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cldn5O54942 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.08■□□□□ 0.33
Cldn5O54942 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cldn5O54942 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cldn5O54942 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.08■□□□□ 0.33
Cldn5O54942 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cldn5O54942 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
Cldn5O54942 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cldn5O54942 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cldn5O54942 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cldn5O54942 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cldn5O54942 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Cldn5O54942 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.08■□□□□ 0.32
Cldn5O54942 Gm36967-201ENSMUST00000193814 266 ntBASIC17.08■□□□□ 0.32
Cldn5O54942 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cldn5O54942 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cldn5O54942 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cldn5O54942 Spr-ps1-201ENSMUST00000089584 605 ntBASIC17.08■□□□□ 0.32
Cldn5O54942 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Cldn5O54942 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cldn5O54942 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cldn5O54942 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
Cldn5O54942 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cldn5O54942 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cldn5O54942 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cldn5O54942 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cldn5O54942 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cldn5O54942 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cldn5O54942 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cldn5O54942 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cldn5O54942 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cldn5O54942 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cldn5O54942 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cldn5O54942 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cldn5O54942 Gm12895-201ENSMUST00000122214 226 ntBASIC17.07■□□□□ 0.32
Cldn5O54942 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC17.07■□□□□ 0.32
Cldn5O54942 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cldn5O54942 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cldn5O54942 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cldn5O54942 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cldn5O54942 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cldn5O54942 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cldn5O54942 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cldn5O54942 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cldn5O54942 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Cldn5O54942 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cldn5O54942 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cldn5O54942 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cldn5O54942 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cldn5O54942 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms