Protein–RNA interactions for Protein: O08788

Dctn1, Dynactin subunit 1, mousemouse

Predictions only

Length 1,281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dctn1O08788 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Dctn1O08788 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Dctn1O08788 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Dctn1O08788 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Dctn1O08788 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Dctn1O08788 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Dctn1O08788 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Dctn1O08788 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Dctn1O08788 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Dctn1O08788 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Dctn1O08788 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Dctn1O08788 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Dctn1O08788 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Dctn1O08788 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Dctn1O08788 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC20.3■□□□□ 0.84
Dctn1O08788 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC20.3■□□□□ 0.84
Dctn1O08788 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Dctn1O08788 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC20.3■□□□□ 0.84
Dctn1O08788 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC20.3■□□□□ 0.84
Dctn1O08788 AC127349.1-201ENSMUST00000224590 266 ntBASIC20.3■□□□□ 0.84
Dctn1O08788 Rbfox2-207ENSMUST00000227533 1041 ntBASIC20.3■□□□□ 0.84
Dctn1O08788 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Dctn1O08788 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Dctn1O08788 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Dctn1O08788 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Dctn1O08788 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Dctn1O08788 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Dctn1O08788 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Dctn1O08788 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Dctn1O08788 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Dctn1O08788 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Dctn1O08788 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Dctn1O08788 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC20.3■□□□□ 0.84
Dctn1O08788 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Dctn1O08788 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Dctn1O08788 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Dctn1O08788 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Dctn1O08788 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC20.29■□□□□ 0.84
Dctn1O08788 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC20.29■□□□□ 0.84
Dctn1O08788 Gm5364-201ENSMUST00000216789 889 ntBASIC20.29■□□□□ 0.84
Dctn1O08788 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Dctn1O08788 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Dctn1O08788 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Dctn1O08788 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Dctn1O08788 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Dctn1O08788 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Dctn1O08788 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
Dctn1O08788 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Dctn1O08788 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Dctn1O08788 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Dctn1O08788 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Dctn1O08788 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC20.28■□□□□ 0.84
Dctn1O08788 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Dctn1O08788 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Dctn1O08788 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Dctn1O08788 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC20.28■□□□□ 0.84
Dctn1O08788 AC114585.2-202ENSMUST00000228094 426 ntBASIC20.28■□□□□ 0.84
Dctn1O08788 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Dctn1O08788 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC20.28■□□□□ 0.84
Dctn1O08788 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Dctn1O08788 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Dctn1O08788 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Dctn1O08788 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Dctn1O08788 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Dctn1O08788 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Dctn1O08788 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Dctn1O08788 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Dctn1O08788 Gm13418-201ENSMUST00000119097 944 ntBASIC20.27■□□□□ 0.84
Dctn1O08788 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Dctn1O08788 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Dctn1O08788 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC20.27■□□□□ 0.84
Dctn1O08788 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Dctn1O08788 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Dctn1O08788 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Dctn1O08788 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Dctn1O08788 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Dctn1O08788 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Dctn1O08788 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Dctn1O08788 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Dctn1O08788 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Dctn1O08788 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Dctn1O08788 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Dctn1O08788 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Dctn1O08788 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Dctn1O08788 Gm11594-201ENSMUST00000122313 162 ntBASIC20.26■□□□□ 0.83
Dctn1O08788 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Dctn1O08788 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Dctn1O08788 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC20.26■□□□□ 0.83
Dctn1O08788 Mir5126-201ENSMUST00000175513 77 ntBASIC20.26■□□□□ 0.83
Dctn1O08788 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Dctn1O08788 Gm43332-201ENSMUST00000202511 1044 ntBASIC20.26■□□□□ 0.83
Dctn1O08788 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Dctn1O08788 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Dctn1O08788 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Dctn1O08788 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Dctn1O08788 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Dctn1O08788 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Dctn1O08788 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Dctn1O08788 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Dctn1O08788 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms