Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC13.98□□□□□ -0.17
Cpsf4lE9Q2N0 Gm5587-201ENSMUST00000206270 674 ntBASIC13.98□□□□□ -0.17
Cpsf4lE9Q2N0 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC13.98□□□□□ -0.17
Cpsf4lE9Q2N0 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC13.98□□□□□ -0.17
Cpsf4lE9Q2N0 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cpsf4lE9Q2N0 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cpsf4lE9Q2N0 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cpsf4lE9Q2N0 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cpsf4lE9Q2N0 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cpsf4lE9Q2N0 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cpsf4lE9Q2N0 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Cpsf4lE9Q2N0 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cpsf4lE9Q2N0 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cpsf4lE9Q2N0 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cpsf4lE9Q2N0 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cpsf4lE9Q2N0 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cpsf4lE9Q2N0 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cpsf4lE9Q2N0 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
Cpsf4lE9Q2N0 Gm8258-201ENSMUST00000055593 1449 ntBASIC13.98□□□□□ -0.17
Cpsf4lE9Q2N0 Gm15743-202ENSMUST00000182690 1901 ntBASIC13.98□□□□□ -0.17
Cpsf4lE9Q2N0 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cpsf4lE9Q2N0 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cpsf4lE9Q2N0 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cpsf4lE9Q2N0 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cpsf4lE9Q2N0 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cpsf4lE9Q2N0 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cpsf4lE9Q2N0 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cpsf4lE9Q2N0 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cpsf4lE9Q2N0 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cpsf4lE9Q2N0 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cpsf4lE9Q2N0 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC13.97□□□□□ -0.17
Cpsf4lE9Q2N0 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC13.97□□□□□ -0.17
Cpsf4lE9Q2N0 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
Cpsf4lE9Q2N0 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cpsf4lE9Q2N0 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cpsf4lE9Q2N0 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cpsf4lE9Q2N0 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cpsf4lE9Q2N0 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cpsf4lE9Q2N0 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC13.97□□□□□ -0.17
Cpsf4lE9Q2N0 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Cpsf4lE9Q2N0 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cpsf4lE9Q2N0 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Cpsf4lE9Q2N0 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cpsf4lE9Q2N0 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cpsf4lE9Q2N0 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cpsf4lE9Q2N0 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cpsf4lE9Q2N0 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC13.97□□□□□ -0.17
Cpsf4lE9Q2N0 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cpsf4lE9Q2N0 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cpsf4lE9Q2N0 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Cpsf4lE9Q2N0 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cpsf4lE9Q2N0 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cpsf4lE9Q2N0 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cpsf4lE9Q2N0 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC13.96□□□□□ -0.17
Cpsf4lE9Q2N0 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cpsf4lE9Q2N0 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cpsf4lE9Q2N0 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cpsf4lE9Q2N0 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cpsf4lE9Q2N0 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
Cpsf4lE9Q2N0 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC13.96□□□□□ -0.17
Cpsf4lE9Q2N0 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC13.96□□□□□ -0.17
Cpsf4lE9Q2N0 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC13.96□□□□□ -0.17
Cpsf4lE9Q2N0 Gm6728-201ENSMUST00000178117 1065 ntBASIC13.96□□□□□ -0.17
Cpsf4lE9Q2N0 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cpsf4lE9Q2N0 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cpsf4lE9Q2N0 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cpsf4lE9Q2N0 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Cpsf4lE9Q2N0 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cpsf4lE9Q2N0 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cpsf4lE9Q2N0 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cpsf4lE9Q2N0 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC13.96□□□□□ -0.17
Cpsf4lE9Q2N0 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.17
Cpsf4lE9Q2N0 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cpsf4lE9Q2N0 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cpsf4lE9Q2N0 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Cpsf4lE9Q2N0 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cpsf4lE9Q2N0 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cpsf4lE9Q2N0 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cpsf4lE9Q2N0 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cpsf4lE9Q2N0 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cpsf4lE9Q2N0 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Cpsf4lE9Q2N0 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cpsf4lE9Q2N0 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cpsf4lE9Q2N0 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC13.96□□□□□ -0.18
Cpsf4lE9Q2N0 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC13.95□□□□□ -0.18
Cpsf4lE9Q2N0 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Cpsf4lE9Q2N0 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cpsf4lE9Q2N0 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cpsf4lE9Q2N0 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cpsf4lE9Q2N0 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cpsf4lE9Q2N0 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC13.95□□□□□ -0.18
Cpsf4lE9Q2N0 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Cpsf4lE9Q2N0 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cpsf4lE9Q2N0 AA414768-201ENSMUST00000121924 1257 ntBASIC13.95□□□□□ -0.18
Cpsf4lE9Q2N0 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cpsf4lE9Q2N0 Gm6345-202ENSMUST00000180900 204 ntBASIC13.95□□□□□ -0.18
Cpsf4lE9Q2N0 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC13.95□□□□□ -0.18
Cpsf4lE9Q2N0 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cpsf4lE9Q2N0 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cpsf4lE9Q2N0 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms