Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chd6A3KFM7 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Chd6A3KFM7 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chd6A3KFM7 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Chd6A3KFM7 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Chd6A3KFM7 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chd6A3KFM7 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chd6A3KFM7 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Chd6A3KFM7 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.35□□□□□ -0.27
Chd6A3KFM7 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
Chd6A3KFM7 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC13.35□□□□□ -0.27
Chd6A3KFM7 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC13.35□□□□□ -0.27
Chd6A3KFM7 AC159106.1-201ENSMUST00000224421 690 ntBASIC13.35□□□□□ -0.27
Chd6A3KFM7 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chd6A3KFM7 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chd6A3KFM7 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chd6A3KFM7 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Chd6A3KFM7 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chd6A3KFM7 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Chd6A3KFM7 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Chd6A3KFM7 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chd6A3KFM7 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC13.35□□□□□ -0.27
Chd6A3KFM7 Gm29791-202ENSMUST00000207888 369 ntBASIC13.35□□□□□ -0.27
Chd6A3KFM7 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC13.35□□□□□ -0.27
Chd6A3KFM7 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chd6A3KFM7 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chd6A3KFM7 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chd6A3KFM7 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Chd6A3KFM7 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Chd6A3KFM7 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC13.35□□□□□ -0.27
Chd6A3KFM7 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Chd6A3KFM7 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chd6A3KFM7 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Chd6A3KFM7 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chd6A3KFM7 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chd6A3KFM7 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chd6A3KFM7 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Chd6A3KFM7 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC13.34□□□□□ -0.27
Chd6A3KFM7 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.34□□□□□ -0.27
Chd6A3KFM7 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chd6A3KFM7 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chd6A3KFM7 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Chd6A3KFM7 AC159621.2-201ENSMUST00000223519 1326 ntBASIC13.34□□□□□ -0.27
Chd6A3KFM7 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Chd6A3KFM7 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Chd6A3KFM7 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.34□□□□□ -0.27
Chd6A3KFM7 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Chd6A3KFM7 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chd6A3KFM7 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chd6A3KFM7 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chd6A3KFM7 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chd6A3KFM7 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chd6A3KFM7 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chd6A3KFM7 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chd6A3KFM7 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chd6A3KFM7 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chd6A3KFM7 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chd6A3KFM7 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC13.34□□□□□ -0.27
Chd6A3KFM7 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Chd6A3KFM7 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Chd6A3KFM7 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Chd6A3KFM7 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
Chd6A3KFM7 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.33□□□□□ -0.27
Chd6A3KFM7 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Chd6A3KFM7 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Chd6A3KFM7 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
Chd6A3KFM7 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Chd6A3KFM7 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Chd6A3KFM7 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chd6A3KFM7 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chd6A3KFM7 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Chd6A3KFM7 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Chd6A3KFM7 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chd6A3KFM7 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Chd6A3KFM7 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chd6A3KFM7 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chd6A3KFM7 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Chd6A3KFM7 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC13.33□□□□□ -0.28
Chd6A3KFM7 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Chd6A3KFM7 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chd6A3KFM7 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Chd6A3KFM7 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chd6A3KFM7 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chd6A3KFM7 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chd6A3KFM7 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chd6A3KFM7 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Chd6A3KFM7 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Chd6A3KFM7 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.33□□□□□ -0.28
Chd6A3KFM7 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Chd6A3KFM7 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Chd6A3KFM7 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Chd6A3KFM7 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Chd6A3KFM7 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Chd6A3KFM7 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chd6A3KFM7 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC13.33□□□□□ -0.28
Chd6A3KFM7 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Chd6A3KFM7 Gm45906-201ENSMUST00000208911 1430 ntBASIC13.33□□□□□ -0.28
Chd6A3KFM7 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Chd6A3KFM7 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chd6A3KFM7 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms