Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cfap99A0A140LIX9 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC19.71■□□□□ 0.75
Cfap99A0A140LIX9 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cfap99A0A140LIX9 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cfap99A0A140LIX9 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.74
Cfap99A0A140LIX9 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Cfap99A0A140LIX9 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cfap99A0A140LIX9 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Cfap99A0A140LIX9 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC19.7■□□□□ 0.74
Cfap99A0A140LIX9 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
Cfap99A0A140LIX9 AC164629.2-201ENSMUST00000217916 270 ntBASIC19.7■□□□□ 0.74
Cfap99A0A140LIX9 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cfap99A0A140LIX9 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC19.7■□□□□ 0.74
Cfap99A0A140LIX9 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cfap99A0A140LIX9 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cfap99A0A140LIX9 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cfap99A0A140LIX9 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cfap99A0A140LIX9 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cfap99A0A140LIX9 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cfap99A0A140LIX9 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cfap99A0A140LIX9 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cfap99A0A140LIX9 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cfap99A0A140LIX9 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cfap99A0A140LIX9 Gm15794-201ENSMUST00000120182 631 ntBASIC19.69■□□□□ 0.74
Cfap99A0A140LIX9 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Cfap99A0A140LIX9 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC19.69■□□□□ 0.74
Cfap99A0A140LIX9 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cfap99A0A140LIX9 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cfap99A0A140LIX9 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cfap99A0A140LIX9 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cfap99A0A140LIX9 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cfap99A0A140LIX9 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cfap99A0A140LIX9 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cfap99A0A140LIX9 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cfap99A0A140LIX9 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cfap99A0A140LIX9 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cfap99A0A140LIX9 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cfap99A0A140LIX9 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Cfap99A0A140LIX9 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cfap99A0A140LIX9 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cfap99A0A140LIX9 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cfap99A0A140LIX9 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cfap99A0A140LIX9 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cfap99A0A140LIX9 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cfap99A0A140LIX9 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC19.68■□□□□ 0.74
Cfap99A0A140LIX9 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cfap99A0A140LIX9 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cfap99A0A140LIX9 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Cfap99A0A140LIX9 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cfap99A0A140LIX9 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Cfap99A0A140LIX9 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cfap99A0A140LIX9 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cfap99A0A140LIX9 Gm11841-201ENSMUST00000117060 1963 ntBASIC19.68■□□□□ 0.74
Cfap99A0A140LIX9 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cfap99A0A140LIX9 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC19.67■□□□□ 0.74
Cfap99A0A140LIX9 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Cfap99A0A140LIX9 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cfap99A0A140LIX9 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cfap99A0A140LIX9 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cfap99A0A140LIX9 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cfap99A0A140LIX9 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
Cfap99A0A140LIX9 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cfap99A0A140LIX9 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Cfap99A0A140LIX9 Gm43514-201ENSMUST00000198852 424 ntBASIC19.67■□□□□ 0.74
Cfap99A0A140LIX9 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cfap99A0A140LIX9 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC19.67■□□□□ 0.74
Cfap99A0A140LIX9 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cfap99A0A140LIX9 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC19.67■□□□□ 0.74
Cfap99A0A140LIX9 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cfap99A0A140LIX9 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
Cfap99A0A140LIX9 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cfap99A0A140LIX9 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cfap99A0A140LIX9 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cfap99A0A140LIX9 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cfap99A0A140LIX9 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Cfap99A0A140LIX9 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC19.66■□□□□ 0.74
Cfap99A0A140LIX9 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cfap99A0A140LIX9 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Cfap99A0A140LIX9 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cfap99A0A140LIX9 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cfap99A0A140LIX9 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cfap99A0A140LIX9 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cfap99A0A140LIX9 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Cfap99A0A140LIX9 Gm6443-201ENSMUST00000203599 874 ntBASIC19.66■□□□□ 0.74
Cfap99A0A140LIX9 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cfap99A0A140LIX9 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cfap99A0A140LIX9 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cfap99A0A140LIX9 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cfap99A0A140LIX9 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC19.65■□□□□ 0.74
Cfap99A0A140LIX9 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cfap99A0A140LIX9 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cfap99A0A140LIX9 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cfap99A0A140LIX9 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cfap99A0A140LIX9 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cfap99A0A140LIX9 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cfap99A0A140LIX9 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
Cfap99A0A140LIX9 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cfap99A0A140LIX9 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cfap99A0A140LIX9 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC19.65■□□□□ 0.74
Cfap99A0A140LIX9 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms