Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv29A0A0G2LB96 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv29A0A0G2LB96 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv29A0A0G2LB96 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv29A0A0G2LB96 Gm12527-201ENSMUST00000117967 564 ntBASIC13.72□□□□□ -0.21
Trbv29A0A0G2LB96 Gm44878-201ENSMUST00000205812 1295 ntBASIC13.72□□□□□ -0.21
Trbv29A0A0G2LB96 Gm7712-202ENSMUST00000222331 1510 ntBASIC13.72□□□□□ -0.21
Trbv29A0A0G2LB96 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv29A0A0G2LB96 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv29A0A0G2LB96 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Trbv29A0A0G2LB96 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv29A0A0G2LB96 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv29A0A0G2LB96 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv29A0A0G2LB96 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Trbv29A0A0G2LB96 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv29A0A0G2LB96 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv29A0A0G2LB96 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv29A0A0G2LB96 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv29A0A0G2LB96 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv29A0A0G2LB96 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv29A0A0G2LB96 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv29A0A0G2LB96 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv29A0A0G2LB96 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv29A0A0G2LB96 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv29A0A0G2LB96 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv29A0A0G2LB96 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv29A0A0G2LB96 Wnt10b-204ENSMUST00000226655 1807 ntBASIC13.71□□□□□ -0.21
Trbv29A0A0G2LB96 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv29A0A0G2LB96 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv29A0A0G2LB96 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv29A0A0G2LB96 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv29A0A0G2LB96 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv29A0A0G2LB96 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Trbv29A0A0G2LB96 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv29A0A0G2LB96 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Trbv29A0A0G2LB96 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv29A0A0G2LB96 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Trbv29A0A0G2LB96 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
Trbv29A0A0G2LB96 Gm10698-201ENSMUST00000182663 604 ntBASIC13.71□□□□□ -0.21
Trbv29A0A0G2LB96 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC13.71□□□□□ -0.21
Trbv29A0A0G2LB96 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv29A0A0G2LB96 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Trbv29A0A0G2LB96 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Trbv29A0A0G2LB96 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Trbv29A0A0G2LB96 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC13.71□□□□□ -0.21
Trbv29A0A0G2LB96 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv29A0A0G2LB96 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Trbv29A0A0G2LB96 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trbv29A0A0G2LB96 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trbv29A0A0G2LB96 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trbv29A0A0G2LB96 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trbv29A0A0G2LB96 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trbv29A0A0G2LB96 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trbv29A0A0G2LB96 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trbv29A0A0G2LB96 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trbv29A0A0G2LB96 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trbv29A0A0G2LB96 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv29A0A0G2LB96 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv29A0A0G2LB96 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv29A0A0G2LB96 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv29A0A0G2LB96 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv29A0A0G2LB96 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv29A0A0G2LB96 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv29A0A0G2LB96 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv29A0A0G2LB96 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv29A0A0G2LB96 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv29A0A0G2LB96 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv29A0A0G2LB96 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv29A0A0G2LB96 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv29A0A0G2LB96 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv29A0A0G2LB96 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv29A0A0G2LB96 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC13.7□□□□□ -0.22
Trbv29A0A0G2LB96 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC13.7□□□□□ -0.22
Trbv29A0A0G2LB96 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv29A0A0G2LB96 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trbv29A0A0G2LB96 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trbv29A0A0G2LB96 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC13.7□□□□□ -0.22
Trbv29A0A0G2LB96 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Trbv29A0A0G2LB96 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC13.7□□□□□ -0.22
Trbv29A0A0G2LB96 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv29A0A0G2LB96 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv29A0A0G2LB96 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv29A0A0G2LB96 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv29A0A0G2LB96 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv29A0A0G2LB96 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv29A0A0G2LB96 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv29A0A0G2LB96 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv29A0A0G2LB96 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv29A0A0G2LB96 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC13.69□□□□□ -0.22
Trbv29A0A0G2LB96 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv29A0A0G2LB96 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv29A0A0G2LB96 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv29A0A0G2LB96 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv29A0A0G2LB96 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv29A0A0G2LB96 AC135637.1-201ENSMUST00000227750 365 ntBASIC13.69□□□□□ -0.22
Trbv29A0A0G2LB96 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv29A0A0G2LB96 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv29A0A0G2LB96 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trbv29A0A0G2LB96 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv29A0A0G2LB96 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms