Protein–RNA interactions for Protein: A0A0B4J1P8

Trbv13-1, T cell receptor beta, variable 13-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-1A0A0B4J1P8 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv13-1A0A0B4J1P8 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Gm43272-201ENSMUST00000200599 1584 ntBASIC12.34□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Trbv13-1A0A0B4J1P8 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv13-1A0A0B4J1P8 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC12.33□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC12.33□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Gm9731-201ENSMUST00000209480 747 ntBASIC12.33□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC12.33□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Gm18101-201ENSMUST00000215769 548 ntBASIC12.33□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Gm37166-201ENSMUST00000195473 2474 ntBASIC12.33□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv13-1A0A0B4J1P8 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv13-1A0A0B4J1P8 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Gm13474-201ENSMUST00000122466 815 ntBASIC12.32□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC12.32□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Gm22697-201ENSMUST00000175194 63 ntBASIC12.32□□□□□ -0.44
Trbv13-1A0A0B4J1P8 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv13-1A0A0B4J1P8 AC134329.2-201ENSMUST00000217897 428 ntBASIC12.32□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trbv13-1A0A0B4J1P8 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC12.31□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Gm23634-201ENSMUST00000175071 91 ntBASIC12.31□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC12.31□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC12.31□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC12.31□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC12.31□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv13-1A0A0B4J1P8 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms