Protein–RNA interactions for Protein: A0A0B4J1I1

Igkv16-104, Immunoglobulin kappa variable 16-104 (Fragment), mousemouse

Predictions only

Length 116 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv16-104A0A0B4J1I1 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC16.66■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Igkv16-104A0A0B4J1I1 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Igkv16-104A0A0B4J1I1 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.65■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.65■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.65■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Gm15467-201ENSMUST00000120582 445 ntBASIC16.65■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Gm42670-201ENSMUST00000201816 1292 ntBASIC16.65■□□□□ 0.26
Igkv16-104A0A0B4J1I1 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Igkv16-104A0A0B4J1I1 AC154222.1-201ENSMUST00000223882 475 ntBASIC16.65■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Igkv16-104A0A0B4J1I1 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Igkv16-104A0A0B4J1I1 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Igkv16-104A0A0B4J1I1 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Igkv16-104A0A0B4J1I1 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC16.64■□□□□ 0.25
Igkv16-104A0A0B4J1I1 Gm2213-201ENSMUST00000197485 688 ntBASIC16.64■□□□□ 0.25
Igkv16-104A0A0B4J1I1 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Igkv16-104A0A0B4J1I1 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Igkv16-104A0A0B4J1I1 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.64■□□□□ 0.25
Igkv16-104A0A0B4J1I1 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Igkv16-104A0A0B4J1I1 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Igkv16-104A0A0B4J1I1 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Igkv16-104A0A0B4J1I1 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Igkv16-104A0A0B4J1I1 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Igkv16-104A0A0B4J1I1 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Igkv16-104A0A0B4J1I1 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Igkv16-104A0A0B4J1I1 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Igkv16-104A0A0B4J1I1 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Igkv16-104A0A0B4J1I1 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Igkv16-104A0A0B4J1I1 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Igkv16-104A0A0B4J1I1 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Igkv16-104A0A0B4J1I1 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Igkv16-104A0A0B4J1I1 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Igkv16-104A0A0B4J1I1 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.63■□□□□ 0.25
Igkv16-104A0A0B4J1I1 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC16.63■□□□□ 0.25
Igkv16-104A0A0B4J1I1 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Igkv16-104A0A0B4J1I1 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Igkv16-104A0A0B4J1I1 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.63■□□□□ 0.25
Igkv16-104A0A0B4J1I1 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Igkv16-104A0A0B4J1I1 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Igkv16-104A0A0B4J1I1 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Igkv16-104A0A0B4J1I1 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Igkv16-104A0A0B4J1I1 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Igkv16-104A0A0B4J1I1 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Igkv16-104A0A0B4J1I1 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Igkv16-104A0A0B4J1I1 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Igkv16-104A0A0B4J1I1 Gm37500-201ENSMUST00000192059 1443 ntBASIC16.62■□□□□ 0.25
Igkv16-104A0A0B4J1I1 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Igkv16-104A0A0B4J1I1 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Igkv16-104A0A0B4J1I1 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Igkv16-104A0A0B4J1I1 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Igkv16-104A0A0B4J1I1 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
Igkv16-104A0A0B4J1I1 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Igkv16-104A0A0B4J1I1 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Igkv16-104A0A0B4J1I1 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC16.62■□□□□ 0.25
Igkv16-104A0A0B4J1I1 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC16.62■□□□□ 0.25
Igkv16-104A0A0B4J1I1 Gm13036-201ENSMUST00000117799 748 ntBASIC16.62■□□□□ 0.25
Igkv16-104A0A0B4J1I1 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Igkv16-104A0A0B4J1I1 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC16.62■□□□□ 0.25
Igkv16-104A0A0B4J1I1 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC16.62■□□□□ 0.25
Igkv16-104A0A0B4J1I1 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.62■□□□□ 0.25
Igkv16-104A0A0B4J1I1 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Igkv16-104A0A0B4J1I1 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Igkv16-104A0A0B4J1I1 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Igkv16-104A0A0B4J1I1 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Igkv16-104A0A0B4J1I1 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Igkv16-104A0A0B4J1I1 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Igkv16-104A0A0B4J1I1 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms