Protein–RNA interactions for Protein: A0A0A6YYP6

Sirpb1a, Signal-regulatory protein beta 1A, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1aA0A0A6YYP6 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.69■□□□□ 0.1
Sirpb1aA0A0A6YYP6 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC15.69■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Gm27000-201ENSMUST00000182943 842 ntBASIC15.69■□□□□ 0.1
Sirpb1aA0A0A6YYP6 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC15.69■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.69■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC15.68■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC15.68■□□□□ 0.1
Sirpb1aA0A0A6YYP6 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC15.68■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC15.68■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sirpb1aA0A0A6YYP6 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
Sirpb1aA0A0A6YYP6 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sirpb1aA0A0A6YYP6 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sirpb1aA0A0A6YYP6 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.67■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Gm20760-201ENSMUST00000179197 648 ntBASIC15.66■□□□□ 0.1
Sirpb1aA0A0A6YYP6 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC15.66■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sirpb1aA0A0A6YYP6 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC15.65■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms