Protein–RNA interactions for Protein: A0A0A6YXN5

Ighv1-43, Immunoglobulin heavy variable V1-43 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-43A0A0A6YXN5 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.21■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Gm44454-201ENSMUST00000198541 138 ntBASIC15.21■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Gm43347-201ENSMUST00000200226 580 ntBASIC15.21■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.21■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
Ighv1-43A0A0A6YXN5 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ighv1-43A0A0A6YXN5 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ighv1-43A0A0A6YXN5 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ighv1-43A0A0A6YXN5 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ighv1-43A0A0A6YXN5 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-43A0A0A6YXN5 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.2■□□□□ 0.02
Ighv1-43A0A0A6YXN5 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-43A0A0A6YXN5 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-43A0A0A6YXN5 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Ighv1-43A0A0A6YXN5 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Ighv1-43A0A0A6YXN5 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-43A0A0A6YXN5 Gm7935-201ENSMUST00000100555 1278 ntBASIC15.2■□□□□ 0.02
Ighv1-43A0A0A6YXN5 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-43A0A0A6YXN5 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-43A0A0A6YXN5 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC15.2■□□□□ 0.02
Ighv1-43A0A0A6YXN5 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC15.2■□□□□ 0.02
Ighv1-43A0A0A6YXN5 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC15.2■□□□□ 0.02
Ighv1-43A0A0A6YXN5 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC15.2■□□□□ 0.02
Ighv1-43A0A0A6YXN5 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC15.2■□□□□ 0.02
Ighv1-43A0A0A6YXN5 AC114585.2-202ENSMUST00000228094 426 ntBASIC15.2■□□□□ 0.02
Ighv1-43A0A0A6YXN5 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-43A0A0A6YXN5 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-43A0A0A6YXN5 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-43A0A0A6YXN5 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-43A0A0A6YXN5 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-43A0A0A6YXN5 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-43A0A0A6YXN5 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-43A0A0A6YXN5 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Ighv1-43A0A0A6YXN5 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Ighv1-43A0A0A6YXN5 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Ighv1-43A0A0A6YXN5 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-43A0A0A6YXN5 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Ighv1-43A0A0A6YXN5 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-43A0A0A6YXN5 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Ighv1-43A0A0A6YXN5 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-43A0A0A6YXN5 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-43A0A0A6YXN5 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-43A0A0A6YXN5 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-43A0A0A6YXN5 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-43A0A0A6YXN5 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-43A0A0A6YXN5 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-43A0A0A6YXN5 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-43A0A0A6YXN5 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-43A0A0A6YXN5 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-43A0A0A6YXN5 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-43A0A0A6YXN5 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Ighv1-43A0A0A6YXN5 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-43A0A0A6YXN5 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-43A0A0A6YXN5 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-43A0A0A6YXN5 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-43A0A0A6YXN5 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-43A0A0A6YXN5 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC15.19■□□□□ 0.02
Ighv1-43A0A0A6YXN5 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15.19■□□□□ 0.02
Ighv1-43A0A0A6YXN5 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC15.19■□□□□ 0.02
Ighv1-43A0A0A6YXN5 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-43A0A0A6YXN5 Gm7461-201ENSMUST00000058918 827 ntBASIC15.19■□□□□ 0.02
Ighv1-43A0A0A6YXN5 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
Ighv1-43A0A0A6YXN5 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Ighv1-43A0A0A6YXN5 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-43A0A0A6YXN5 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-43A0A0A6YXN5 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-43A0A0A6YXN5 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
Ighv1-43A0A0A6YXN5 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-43A0A0A6YXN5 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Ighv1-43A0A0A6YXN5 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-43A0A0A6YXN5 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.19■□□□□ 0.02
Ighv1-43A0A0A6YXN5 AC121598.2-201ENSMUST00000228376 2325 ntBASIC15.18■□□□□ 0.02
Ighv1-43A0A0A6YXN5 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Ighv1-43A0A0A6YXN5 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-43A0A0A6YXN5 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-43A0A0A6YXN5 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-43A0A0A6YXN5 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-43A0A0A6YXN5 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-43A0A0A6YXN5 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Ighv1-43A0A0A6YXN5 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-43A0A0A6YXN5 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-43A0A0A6YXN5 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-43A0A0A6YXN5 Gm12644-201ENSMUST00000119935 606 ntBASIC15.18■□□□□ 0.02
Ighv1-43A0A0A6YXN5 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-43A0A0A6YXN5 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-43A0A0A6YXN5 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-43A0A0A6YXN5 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Ighv1-43A0A0A6YXN5 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-43A0A0A6YXN5 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-43A0A0A6YXN5 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC15.18■□□□□ 0.02
Ighv1-43A0A0A6YXN5 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-43A0A0A6YXN5 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms