Protein–RNA interactions for Protein: A0A0A6YXE0

Ighv1-59, Immunoglobulin heavy variable V1-59 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-59A0A0A6YXE0 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Gm8839-201ENSMUST00000121279 1645 ntBASIC11.68□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ighv1-59A0A0A6YXE0 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ighv1-59A0A0A6YXE0 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC11.67□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC11.67□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC11.67□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC11.67□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Gm44450-201ENSMUST00000199528 114 ntBASIC11.67□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ighv1-59A0A0A6YXE0 AC158538.1-201ENSMUST00000225870 294 ntBASIC11.67□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Gm7292-201ENSMUST00000194706 2527 ntBASIC11.67□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC11.67□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Gm13216-201ENSMUST00000117145 591 ntBASIC11.66□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC11.66□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Zfp264-201ENSMUST00000208656 1563 ntBASIC11.66□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC11.66□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC11.66□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC11.65□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC11.65□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Gm37722-201ENSMUST00000193757 208 ntBASIC11.65□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Gm18421-201ENSMUST00000204122 625 ntBASIC11.65□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Ighv1-59A0A0A6YXE0 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Ighv1-59A0A0A6YXE0 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms