Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trbc1A0A0A6YWV4 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbc1A0A0A6YWV4 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbc1A0A0A6YWV4 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbc1A0A0A6YWV4 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbc1A0A0A6YWV4 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbc1A0A0A6YWV4 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trbc1A0A0A6YWV4 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trbc1A0A0A6YWV4 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Trbc1A0A0A6YWV4 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trbc1A0A0A6YWV4 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.16■□□□□ 0.02
Trbc1A0A0A6YWV4 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trbc1A0A0A6YWV4 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trbc1A0A0A6YWV4 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trbc1A0A0A6YWV4 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trbc1A0A0A6YWV4 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trbc1A0A0A6YWV4 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trbc1A0A0A6YWV4 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trbc1A0A0A6YWV4 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Trbc1A0A0A6YWV4 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC15.16■□□□□ 0.02
Trbc1A0A0A6YWV4 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Trbc1A0A0A6YWV4 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trbc1A0A0A6YWV4 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC15.16■□□□□ 0.02
Trbc1A0A0A6YWV4 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trbc1A0A0A6YWV4 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trbc1A0A0A6YWV4 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trbc1A0A0A6YWV4 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trbc1A0A0A6YWV4 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trbc1A0A0A6YWV4 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trbc1A0A0A6YWV4 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.16■□□□□ 0.02
Trbc1A0A0A6YWV4 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Trbc1A0A0A6YWV4 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbc1A0A0A6YWV4 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbc1A0A0A6YWV4 Gm16499-203ENSMUST00000204633 2177 ntBASIC15.15■□□□□ 0.02
Trbc1A0A0A6YWV4 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbc1A0A0A6YWV4 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbc1A0A0A6YWV4 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbc1A0A0A6YWV4 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbc1A0A0A6YWV4 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trbc1A0A0A6YWV4 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Trbc1A0A0A6YWV4 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Trbc1A0A0A6YWV4 AA414768-201ENSMUST00000121924 1257 ntBASIC15.15■□□□□ 0.02
Trbc1A0A0A6YWV4 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC15.15■□□□□ 0.02
Trbc1A0A0A6YWV4 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Trbc1A0A0A6YWV4 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Trbc1A0A0A6YWV4 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbc1A0A0A6YWV4 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbc1A0A0A6YWV4 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbc1A0A0A6YWV4 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbc1A0A0A6YWV4 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC15.15■□□□□ 0.02
Trbc1A0A0A6YWV4 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbc1A0A0A6YWV4 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbc1A0A0A6YWV4 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbc1A0A0A6YWV4 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbc1A0A0A6YWV4 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbc1A0A0A6YWV4 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbc1A0A0A6YWV4 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbc1A0A0A6YWV4 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbc1A0A0A6YWV4 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbc1A0A0A6YWV4 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbc1A0A0A6YWV4 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trbc1A0A0A6YWV4 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trbc1A0A0A6YWV4 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trbc1A0A0A6YWV4 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trbc1A0A0A6YWV4 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trbc1A0A0A6YWV4 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trbc1A0A0A6YWV4 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trbc1A0A0A6YWV4 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Trbc1A0A0A6YWV4 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trbc1A0A0A6YWV4 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trbc1A0A0A6YWV4 Gm13186-201ENSMUST00000118031 316 ntBASIC15.14■□□□□ 0.01
Trbc1A0A0A6YWV4 Gm11355-201ENSMUST00000121120 306 ntBASIC15.14■□□□□ 0.01
Trbc1A0A0A6YWV4 Gm9013-201ENSMUST00000132939 882 ntBASIC15.14■□□□□ 0.01
Trbc1A0A0A6YWV4 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC15.14■□□□□ 0.01
Trbc1A0A0A6YWV4 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trbc1A0A0A6YWV4 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC15.14■□□□□ 0.01
Trbc1A0A0A6YWV4 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC15.14■□□□□ 0.01
Trbc1A0A0A6YWV4 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC15.14■□□□□ 0.01
Trbc1A0A0A6YWV4 Gm6728-201ENSMUST00000178117 1065 ntBASIC15.14■□□□□ 0.01
Trbc1A0A0A6YWV4 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC15.14■□□□□ 0.01
Trbc1A0A0A6YWV4 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trbc1A0A0A6YWV4 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trbc1A0A0A6YWV4 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trbc1A0A0A6YWV4 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trbc1A0A0A6YWV4 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trbc1A0A0A6YWV4 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trbc1A0A0A6YWV4 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trbc1A0A0A6YWV4 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trbc1A0A0A6YWV4 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trbc1A0A0A6YWV4 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trbc1A0A0A6YWV4 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC15.14■□□□□ 0.01
Trbc1A0A0A6YWV4 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Trbc1A0A0A6YWV4 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbc1A0A0A6YWV4 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trbc1A0A0A6YWV4 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbc1A0A0A6YWV4 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbc1A0A0A6YWV4 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbc1A0A0A6YWV4 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.13■□□□□ 0.01
Trbc1A0A0A6YWV4 Gm6190-201ENSMUST00000220683 1374 ntBASIC15.13■□□□□ 0.01
Trbc1A0A0A6YWV4 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms