Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav5-4A0A075B652 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav5-4A0A075B652 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav5-4A0A075B652 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav5-4A0A075B652 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav5-4A0A075B652 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav5-4A0A075B652 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav5-4A0A075B652 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC13.8□□□□□ -0.2
Trav5-4A0A075B652 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav5-4A0A075B652 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav5-4A0A075B652 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav5-4A0A075B652 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav5-4A0A075B652 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Trav5-4A0A075B652 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav5-4A0A075B652 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav5-4A0A075B652 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav5-4A0A075B652 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC13.8□□□□□ -0.2
Trav5-4A0A075B652 Gm7791-201ENSMUST00000219066 539 ntBASIC13.8□□□□□ -0.2
Trav5-4A0A075B652 Arhgef33-211ENSMUST00000225658 473 ntBASIC13.8□□□□□ -0.2
Trav5-4A0A075B652 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav5-4A0A075B652 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav5-4A0A075B652 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav5-4A0A075B652 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav5-4A0A075B652 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Trav5-4A0A075B652 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav5-4A0A075B652 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav5-4A0A075B652 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC13.8□□□□□ -0.2
Trav5-4A0A075B652 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC13.8□□□□□ -0.2
Trav5-4A0A075B652 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav5-4A0A075B652 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav5-4A0A075B652 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav5-4A0A075B652 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav5-4A0A075B652 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav5-4A0A075B652 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC13.8□□□□□ -0.2
Trav5-4A0A075B652 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav5-4A0A075B652 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav5-4A0A075B652 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav5-4A0A075B652 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Trav5-4A0A075B652 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav5-4A0A075B652 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav5-4A0A075B652 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav5-4A0A075B652 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav5-4A0A075B652 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC13.79□□□□□ -0.2
Trav5-4A0A075B652 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav5-4A0A075B652 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC13.79□□□□□ -0.2
Trav5-4A0A075B652 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav5-4A0A075B652 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC13.79□□□□□ -0.2
Trav5-4A0A075B652 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav5-4A0A075B652 Gm27011-201ENSMUST00000182352 972 ntBASIC13.79□□□□□ -0.2
Trav5-4A0A075B652 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC13.79□□□□□ -0.2
Trav5-4A0A075B652 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Trav5-4A0A075B652 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC13.79□□□□□ -0.2
Trav5-4A0A075B652 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav5-4A0A075B652 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC13.79□□□□□ -0.2
Trav5-4A0A075B652 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav5-4A0A075B652 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav5-4A0A075B652 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav5-4A0A075B652 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Trav5-4A0A075B652 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Trav5-4A0A075B652 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav5-4A0A075B652 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav5-4A0A075B652 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Trav5-4A0A075B652 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav5-4A0A075B652 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav5-4A0A075B652 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav5-4A0A075B652 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav5-4A0A075B652 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav5-4A0A075B652 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC13.78□□□□□ -0.2
Trav5-4A0A075B652 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav5-4A0A075B652 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Trav5-4A0A075B652 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.78□□□□□ -0.2
Trav5-4A0A075B652 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.78□□□□□ -0.2
Trav5-4A0A075B652 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Trav5-4A0A075B652 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC13.78□□□□□ -0.2
Trav5-4A0A075B652 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC13.78□□□□□ -0.2
Trav5-4A0A075B652 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav5-4A0A075B652 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav5-4A0A075B652 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav5-4A0A075B652 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC13.78□□□□□ -0.2
Trav5-4A0A075B652 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC13.78□□□□□ -0.2
Trav5-4A0A075B652 Gm13181-201ENSMUST00000120117 1069 ntBASIC13.78□□□□□ -0.2
Trav5-4A0A075B652 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav5-4A0A075B652 Arhgef4-208ENSMUST00000211073 171 ntBASIC13.78□□□□□ -0.2
Trav5-4A0A075B652 Odf3b-204ENSMUST00000227834 930 ntBASIC13.78□□□□□ -0.2
Trav5-4A0A075B652 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav5-4A0A075B652 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav5-4A0A075B652 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav5-4A0A075B652 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav5-4A0A075B652 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav5-4A0A075B652 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav5-4A0A075B652 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav5-4A0A075B652 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Trav5-4A0A075B652 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav5-4A0A075B652 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav5-4A0A075B652 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav5-4A0A075B652 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav5-4A0A075B652 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC13.77□□□□□ -0.2
Trav5-4A0A075B652 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Trav5-4A0A075B652 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trav5-4A0A075B652 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms