Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav8-1A0A075B641 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav8-1A0A075B641 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Trav8-1A0A075B641 Mir8112-201ENSMUST00000184382 131 ntBASIC11.91□□□□□ -0.5
Trav8-1A0A075B641 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC11.91□□□□□ -0.5
Trav8-1A0A075B641 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC11.91□□□□□ -0.5
Trav8-1A0A075B641 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav8-1A0A075B641 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav8-1A0A075B641 Gm9988-201ENSMUST00000069786 435 ntBASIC11.91□□□□□ -0.5
Trav8-1A0A075B641 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav8-1A0A075B641 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Trav8-1A0A075B641 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Trav8-1A0A075B641 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav8-1A0A075B641 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav8-1A0A075B641 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav8-1A0A075B641 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC11.91□□□□□ -0.5
Trav8-1A0A075B641 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC11.91□□□□□ -0.5
Trav8-1A0A075B641 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav8-1A0A075B641 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav8-1A0A075B641 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC11.91□□□□□ -0.5
Trav8-1A0A075B641 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Trav8-1A0A075B641 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC11.9□□□□□ -0.5
Trav8-1A0A075B641 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Trav8-1A0A075B641 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav8-1A0A075B641 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav8-1A0A075B641 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav8-1A0A075B641 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
Trav8-1A0A075B641 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.5
Trav8-1A0A075B641 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav8-1A0A075B641 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC11.9□□□□□ -0.5
Trav8-1A0A075B641 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav8-1A0A075B641 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC11.9□□□□□ -0.5
Trav8-1A0A075B641 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC11.9□□□□□ -0.5
Trav8-1A0A075B641 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC11.9□□□□□ -0.5
Trav8-1A0A075B641 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav8-1A0A075B641 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Trav8-1A0A075B641 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav8-1A0A075B641 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav8-1A0A075B641 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
Trav8-1A0A075B641 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav8-1A0A075B641 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Trav8-1A0A075B641 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Trav8-1A0A075B641 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC11.9□□□□□ -0.5
Trav8-1A0A075B641 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Trav8-1A0A075B641 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav8-1A0A075B641 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav8-1A0A075B641 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Trav8-1A0A075B641 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav8-1A0A075B641 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav8-1A0A075B641 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav8-1A0A075B641 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
Trav8-1A0A075B641 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
Trav8-1A0A075B641 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav8-1A0A075B641 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav8-1A0A075B641 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav8-1A0A075B641 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav8-1A0A075B641 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav8-1A0A075B641 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav8-1A0A075B641 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC11.89□□□□□ -0.51
Trav8-1A0A075B641 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trav8-1A0A075B641 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav8-1A0A075B641 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav8-1A0A075B641 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Trav8-1A0A075B641 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav8-1A0A075B641 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav8-1A0A075B641 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC11.89□□□□□ -0.51
Trav8-1A0A075B641 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trav8-1A0A075B641 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Trav8-1A0A075B641 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC11.89□□□□□ -0.51
Trav8-1A0A075B641 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav8-1A0A075B641 Gm45417-201ENSMUST00000209533 758 ntBASIC11.89□□□□□ -0.51
Trav8-1A0A075B641 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav8-1A0A075B641 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav8-1A0A075B641 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav8-1A0A075B641 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav8-1A0A075B641 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav8-1A0A075B641 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav8-1A0A075B641 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav8-1A0A075B641 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav8-1A0A075B641 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav8-1A0A075B641 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav8-1A0A075B641 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav8-1A0A075B641 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav8-1A0A075B641 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav8-1A0A075B641 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Trav8-1A0A075B641 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC11.89□□□□□ -0.51
Trav8-1A0A075B641 AC154412.1-201ENSMUST00000226540 2786 ntBASIC11.89□□□□□ -0.51
Trav8-1A0A075B641 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav8-1A0A075B641 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav8-1A0A075B641 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav8-1A0A075B641 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav8-1A0A075B641 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav8-1A0A075B641 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav8-1A0A075B641 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav8-1A0A075B641 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC11.88□□□□□ -0.51
Trav8-1A0A075B641 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav8-1A0A075B641 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav8-1A0A075B641 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav8-1A0A075B641 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav8-1A0A075B641 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms