Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC14.63□□□□□ -0.07
Trav6-7-dv9A0A075B639 AC159205.6-201ENSMUST00000224935 887 ntBASIC14.63□□□□□ -0.07
Trav6-7-dv9A0A075B639 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-7-dv9A0A075B639 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-7-dv9A0A075B639 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Trav6-7-dv9A0A075B639 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.63□□□□□ -0.07
Trav6-7-dv9A0A075B639 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-7-dv9A0A075B639 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-7-dv9A0A075B639 Phf7-203ENSMUST00000226565 1971 ntBASIC14.63□□□□□ -0.07
Trav6-7-dv9A0A075B639 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-7-dv9A0A075B639 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-7-dv9A0A075B639 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-7-dv9A0A075B639 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trav6-7-dv9A0A075B639 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Trav6-7-dv9A0A075B639 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-7-dv9A0A075B639 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-7-dv9A0A075B639 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Trav6-7-dv9A0A075B639 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-7-dv9A0A075B639 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-7-dv9A0A075B639 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-7-dv9A0A075B639 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-7-dv9A0A075B639 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-7-dv9A0A075B639 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-7-dv9A0A075B639 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-7-dv9A0A075B639 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-7-dv9A0A075B639 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Trav6-7-dv9A0A075B639 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-7-dv9A0A075B639 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Trav6-7-dv9A0A075B639 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-7-dv9A0A075B639 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-7-dv9A0A075B639 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC14.62□□□□□ -0.07
Trav6-7-dv9A0A075B639 Gm9484-201ENSMUST00000195892 1159 ntBASIC14.62□□□□□ -0.07
Trav6-7-dv9A0A075B639 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-7-dv9A0A075B639 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-7-dv9A0A075B639 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Trav6-7-dv9A0A075B639 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-7-dv9A0A075B639 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-7-dv9A0A075B639 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-7-dv9A0A075B639 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-7-dv9A0A075B639 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-7-dv9A0A075B639 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-7-dv9A0A075B639 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-7-dv9A0A075B639 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Trav6-7-dv9A0A075B639 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-7-dv9A0A075B639 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-7-dv9A0A075B639 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-7-dv9A0A075B639 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-7-dv9A0A075B639 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-7-dv9A0A075B639 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-7-dv9A0A075B639 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC14.61□□□□□ -0.07
Trav6-7-dv9A0A075B639 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-7-dv9A0A075B639 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-7-dv9A0A075B639 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-7-dv9A0A075B639 Zfp264-201ENSMUST00000208656 1563 ntBASIC14.61□□□□□ -0.07
Trav6-7-dv9A0A075B639 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Trav6-7-dv9A0A075B639 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-7-dv9A0A075B639 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-7-dv9A0A075B639 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-7-dv9A0A075B639 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-7-dv9A0A075B639 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-7-dv9A0A075B639 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-7-dv9A0A075B639 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-7-dv9A0A075B639 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-7-dv9A0A075B639 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-7-dv9A0A075B639 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC14.61□□□□□ -0.07
Trav6-7-dv9A0A075B639 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Trav6-7-dv9A0A075B639 Gm13436-201ENSMUST00000120418 567 ntBASIC14.61□□□□□ -0.07
Trav6-7-dv9A0A075B639 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-7-dv9A0A075B639 Gm7213-201ENSMUST00000215977 950 ntBASIC14.61□□□□□ -0.07
Trav6-7-dv9A0A075B639 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-7-dv9A0A075B639 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-7-dv9A0A075B639 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC14.61□□□□□ -0.07
Trav6-7-dv9A0A075B639 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-7-dv9A0A075B639 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-7-dv9A0A075B639 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-7-dv9A0A075B639 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-7-dv9A0A075B639 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-7-dv9A0A075B639 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Trav6-7-dv9A0A075B639 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Trav6-7-dv9A0A075B639 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-7-dv9A0A075B639 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
Trav6-7-dv9A0A075B639 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-7-dv9A0A075B639 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Trav6-7-dv9A0A075B639 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.6□□□□□ -0.07
Trav6-7-dv9A0A075B639 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-7-dv9A0A075B639 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-7-dv9A0A075B639 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-7-dv9A0A075B639 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-7-dv9A0A075B639 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC14.6□□□□□ -0.07
Trav6-7-dv9A0A075B639 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Trav6-7-dv9A0A075B639 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC14.6□□□□□ -0.07
Trav6-7-dv9A0A075B639 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC14.6□□□□□ -0.07
Trav6-7-dv9A0A075B639 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC14.6□□□□□ -0.07
Trav6-7-dv9A0A075B639 Gm29994-201ENSMUST00000195495 1193 ntBASIC14.6□□□□□ -0.07
Trav6-7-dv9A0A075B639 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC14.6□□□□□ -0.07
Trav6-7-dv9A0A075B639 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC14.6□□□□□ -0.07
Trav6-7-dv9A0A075B639 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-7-dv9A0A075B639 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-7-dv9A0A075B639 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-7-dv9A0A075B639 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms