Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 CT010478.1-201ENSMUST00000220747 2787 ntBASIC14.08□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.08□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC14.08□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC14.08□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC14.08□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC14.07□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.07□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Gm27275-201ENSMUST00000184318 272 ntBASIC14.07□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.07□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.06□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 H2-K2-201ENSMUST00000174250 1049 ntBASIC14.06□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Gm27000-201ENSMUST00000182943 842 ntBASIC14.06□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Gm43183-201ENSMUST00000200632 547 ntBASIC14.06□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Gm9731-201ENSMUST00000209480 747 ntBASIC14.06□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC14.05□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC14.05□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 AC124581.1-201ENSMUST00000225416 1399 ntBASIC14.05□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC14.05□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms