Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13d-1A0A075B606 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13d-1A0A075B606 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trav13d-1A0A075B606 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Trav13d-1A0A075B606 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13d-1A0A075B606 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC12.13□□□□□ -0.47
Trav13d-1A0A075B606 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13d-1A0A075B606 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13d-1A0A075B606 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13d-1A0A075B606 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13d-1A0A075B606 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13d-1A0A075B606 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trav13d-1A0A075B606 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13d-1A0A075B606 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13d-1A0A075B606 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Trav13d-1A0A075B606 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13d-1A0A075B606 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC12.13□□□□□ -0.47
Trav13d-1A0A075B606 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Trav13d-1A0A075B606 Gm5587-201ENSMUST00000206270 674 ntBASIC12.13□□□□□ -0.47
Trav13d-1A0A075B606 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13d-1A0A075B606 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13d-1A0A075B606 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13d-1A0A075B606 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13d-1A0A075B606 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13d-1A0A075B606 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13d-1A0A075B606 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13d-1A0A075B606 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trav13d-1A0A075B606 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC12.13□□□□□ -0.47
Trav13d-1A0A075B606 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC12.13□□□□□ -0.47
Trav13d-1A0A075B606 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Trav13d-1A0A075B606 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13d-1A0A075B606 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13d-1A0A075B606 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13d-1A0A075B606 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13d-1A0A075B606 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC12.12□□□□□ -0.47
Trav13d-1A0A075B606 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13d-1A0A075B606 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13d-1A0A075B606 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13d-1A0A075B606 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13d-1A0A075B606 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13d-1A0A075B606 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trav13d-1A0A075B606 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13d-1A0A075B606 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13d-1A0A075B606 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13d-1A0A075B606 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13d-1A0A075B606 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13d-1A0A075B606 Gm7284-201ENSMUST00000131667 944 ntBASIC12.12□□□□□ -0.47
Trav13d-1A0A075B606 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13d-1A0A075B606 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13d-1A0A075B606 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13d-1A0A075B606 Gm10459-201ENSMUST00000202708 1155 ntBASIC12.12□□□□□ -0.47
Trav13d-1A0A075B606 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13d-1A0A075B606 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC12.12□□□□□ -0.47
Trav13d-1A0A075B606 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13d-1A0A075B606 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13d-1A0A075B606 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13d-1A0A075B606 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC12.12□□□□□ -0.47
Trav13d-1A0A075B606 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Trav13d-1A0A075B606 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13d-1A0A075B606 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13d-1A0A075B606 Gm20628-201ENSMUST00000177363 3215 ntBASIC12.12□□□□□ -0.47
Trav13d-1A0A075B606 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13d-1A0A075B606 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13d-1A0A075B606 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13d-1A0A075B606 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13d-1A0A075B606 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13d-1A0A075B606 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13d-1A0A075B606 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trav13d-1A0A075B606 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Trav13d-1A0A075B606 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13d-1A0A075B606 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13d-1A0A075B606 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13d-1A0A075B606 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13d-1A0A075B606 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13d-1A0A075B606 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC12.11□□□□□ -0.47
Trav13d-1A0A075B606 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13d-1A0A075B606 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trav13d-1A0A075B606 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13d-1A0A075B606 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13d-1A0A075B606 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13d-1A0A075B606 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Trav13d-1A0A075B606 Gm3272-201ENSMUST00000181181 1229 ntBASIC12.11□□□□□ -0.47
Trav13d-1A0A075B606 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav13d-1A0A075B606 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13d-1A0A075B606 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13d-1A0A075B606 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13d-1A0A075B606 Gm10566-201ENSMUST00000086739 996 ntBASIC12.11□□□□□ -0.47
Trav13d-1A0A075B606 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13d-1A0A075B606 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav13d-1A0A075B606 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav13d-1A0A075B606 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Trav13d-1A0A075B606 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Trav13d-1A0A075B606 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trav13d-1A0A075B606 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav13d-1A0A075B606 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13d-1A0A075B606 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13d-1A0A075B606 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13d-1A0A075B606 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13d-1A0A075B606 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13d-1A0A075B606 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms