Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Gm13559-201ENSMUST00000120476 863 ntBASIC15.34■□□□□ 0.05
Trav1A0A075B5Z4 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav1A0A075B5Z4 Gm20472-201ENSMUST00000174403 1240 ntBASIC15.34■□□□□ 0.05
Trav1A0A075B5Z4 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Trav1A0A075B5Z4 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC15.34■□□□□ 0.05
Trav1A0A075B5Z4 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav1A0A075B5Z4 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC15.34■□□□□ 0.05
Trav1A0A075B5Z4 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav1A0A075B5Z4 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav1A0A075B5Z4 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Trav1A0A075B5Z4 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav1A0A075B5Z4 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Trav1A0A075B5Z4 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Trav1A0A075B5Z4 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav1A0A075B5Z4 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav1A0A075B5Z4 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav1A0A075B5Z4 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav1A0A075B5Z4 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav1A0A075B5Z4 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav1A0A075B5Z4 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav1A0A075B5Z4 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Trav1A0A075B5Z4 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav1A0A075B5Z4 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC15.33■□□□□ 0.05
Trav1A0A075B5Z4 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav1A0A075B5Z4 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav1A0A075B5Z4 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav1A0A075B5Z4 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav1A0A075B5Z4 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav1A0A075B5Z4 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.05
Trav1A0A075B5Z4 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav1A0A075B5Z4 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Trav1A0A075B5Z4 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Trav1A0A075B5Z4 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Trav1A0A075B5Z4 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav1A0A075B5Z4 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC15.33■□□□□ 0.04
Trav1A0A075B5Z4 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav1A0A075B5Z4 Gm29707-201ENSMUST00000196325 491 ntBASIC15.33■□□□□ 0.04
Trav1A0A075B5Z4 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav1A0A075B5Z4 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav1A0A075B5Z4 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav1A0A075B5Z4 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav1A0A075B5Z4 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.33■□□□□ 0.04
Trav1A0A075B5Z4 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav1A0A075B5Z4 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav1A0A075B5Z4 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav1A0A075B5Z4 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav1A0A075B5Z4 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav1A0A075B5Z4 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav1A0A075B5Z4 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav1A0A075B5Z4 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav1A0A075B5Z4 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav1A0A075B5Z4 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav1A0A075B5Z4 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav1A0A075B5Z4 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trav1A0A075B5Z4 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trav1A0A075B5Z4 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav1A0A075B5Z4 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Trav1A0A075B5Z4 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav1A0A075B5Z4 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.32■□□□□ 0.04
Trav1A0A075B5Z4 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav1A0A075B5Z4 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav1A0A075B5Z4 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trav1A0A075B5Z4 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC15.32■□□□□ 0.04
Trav1A0A075B5Z4 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav1A0A075B5Z4 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC15.32■□□□□ 0.04
Trav1A0A075B5Z4 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trav1A0A075B5Z4 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav1A0A075B5Z4 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.32■□□□□ 0.04
Trav1A0A075B5Z4 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav1A0A075B5Z4 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Trav1A0A075B5Z4 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav1A0A075B5Z4 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC15.32■□□□□ 0.04
Trav1A0A075B5Z4 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav1A0A075B5Z4 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav1A0A075B5Z4 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav1A0A075B5Z4 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.31■□□□□ 0.04
Trav1A0A075B5Z4 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav1A0A075B5Z4 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav1A0A075B5Z4 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Trav1A0A075B5Z4 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav1A0A075B5Z4 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC15.31■□□□□ 0.04
Trav1A0A075B5Z4 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav1A0A075B5Z4 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav1A0A075B5Z4 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav1A0A075B5Z4 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav1A0A075B5Z4 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav1A0A075B5Z4 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav1A0A075B5Z4 Gm11336-201ENSMUST00000118168 334 ntBASIC15.31■□□□□ 0.04
Trav1A0A075B5Z4 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.31■□□□□ 0.04
Trav1A0A075B5Z4 Mir1668-201ENSMUST00000184114 107 ntBASIC15.31■□□□□ 0.04
Trav1A0A075B5Z4 Gm36967-201ENSMUST00000193814 266 ntBASIC15.31■□□□□ 0.04
Trav1A0A075B5Z4 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav1A0A075B5Z4 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC15.31■□□□□ 0.04
Trav1A0A075B5Z4 AC112142.1-201ENSMUST00000228796 918 ntBASIC15.31■□□□□ 0.04
Trav1A0A075B5Z4 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav1A0A075B5Z4 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav1A0A075B5Z4 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav1A0A075B5Z4 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav1A0A075B5Z4 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav1A0A075B5Z4 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms