Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 AC090897.3-201ENST00000636973 1157 ntBASIC1.74□□□□□ -2.13
LINC01558Q9Y6Z2 MFSD8-233ENST00000641482 4860 ntBASIC1.74□□□□□ -2.13
LINC01558Q9Y6Z2 MTCO1P8-201ENST00000416914 1523 ntBASIC1.74□□□□□ -2.13
LINC01558Q9Y6Z2 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC1.74□□□□□ -2.13
LINC01558Q9Y6Z2 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC1.74□□□□□ -2.13
LINC01558Q9Y6Z2 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC1.74□□□□□ -2.13
LINC01558Q9Y6Z2 AC139713.2-214ENST00000642059 1811 ntBASIC1.73□□□□□ -2.13
LINC01558Q9Y6Z2 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
LINC01558Q9Y6Z2 SLC9B1P1-201ENST00000331172 1337 ntBASIC1.73□□□□□ -2.13
LINC01558Q9Y6Z2 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
LINC01558Q9Y6Z2 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
LINC01558Q9Y6Z2 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC1.73□□□□□ -2.13
LINC01558Q9Y6Z2 RNU6-335P-201ENST00000364563 113 ntBASIC1.73□□□□□ -2.13
LINC01558Q9Y6Z2 SNORA62-201ENST00000365493 153 ntBASIC1.73□□□□□ -2.13
LINC01558Q9Y6Z2 CD24P4-201ENST00000382840 243 ntBASIC1.73□□□□□ -2.13
LINC01558Q9Y6Z2 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
LINC01558Q9Y6Z2 SMIM30-201ENST00000397764 1070 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
LINC01558Q9Y6Z2 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
LINC01558Q9Y6Z2 FO393413.1-201ENST00000402892 195 ntBASIC1.73□□□□□ -2.13
LINC01558Q9Y6Z2 AL590004.2-201ENST00000404787 371 ntBASIC1.73□□□□□ -2.13
LINC01558Q9Y6Z2 U3.36-201ENST00000408418 213 ntBASIC1.73□□□□□ -2.13
LINC01558Q9Y6Z2 RN7SKP229-201ENST00000410465 302 ntBASIC1.73□□□□□ -2.13
LINC01558Q9Y6Z2 RN7SKP220-201ENST00000410611 288 ntBASIC1.73□□□□□ -2.13
LINC01558Q9Y6Z2 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC1.73□□□□□ -2.13
LINC01558Q9Y6Z2 AC073310.1-201ENST00000423226 1033 ntBASIC1.73□□□□□ -2.13
LINC01558Q9Y6Z2 SDCBPP2-201ENST00000424643 885 ntBASIC1.73□□□□□ -2.13
LINC01558Q9Y6Z2 RPL21P66-201ENST00000426566 466 ntBASIC1.73□□□□□ -2.13
LINC01558Q9Y6Z2 AC097713.2-201ENST00000430199 356 ntBASIC1.73□□□□□ -2.13
LINC01558Q9Y6Z2 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC1.73□□□□□ -2.13
LINC01558Q9Y6Z2 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC1.73□□□□□ -2.13
LINC01558Q9Y6Z2 CST9LP2-201ENST00000437612 320 ntBASIC1.73□□□□□ -2.13
LINC01558Q9Y6Z2 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC1.73□□□□□ -2.13
LINC01558Q9Y6Z2 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC1.73□□□□□ -2.13
LINC01558Q9Y6Z2 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
LINC01558Q9Y6Z2 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC1.73□□□□□ -2.13
LINC01558Q9Y6Z2 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC1.73□□□□□ -2.13
LINC01558Q9Y6Z2 AP002371.1-201ENST00000463604 433 ntBASIC1.73□□□□□ -2.13
LINC01558Q9Y6Z2 MTCO3P35-201ENST00000485582 781 ntBASIC1.73□□□□□ -2.13
LINC01558Q9Y6Z2 AC093840.1-201ENST00000511599 336 ntBASIC1.73□□□□□ -2.13
LINC01558Q9Y6Z2 AC021242.2-202ENST00000522129 545 ntTSL 4 BASIC1.73□□□□□ -2.13
LINC01558Q9Y6Z2 IGKV2-4-201ENST00000523070 340 ntBASIC1.73□□□□□ -2.13
LINC01558Q9Y6Z2 AP001207.1-201ENST00000524051 481 ntBASIC1.73□□□□□ -2.13
LINC01558Q9Y6Z2 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC1.73□□□□□ -2.13
LINC01558Q9Y6Z2 BRD9P1-201ENST00000529855 560 ntBASIC1.73□□□□□ -2.13
LINC01558Q9Y6Z2 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
LINC01558Q9Y6Z2 AC025423.2-201ENST00000537570 439 ntBASIC1.73□□□□□ -2.13
LINC01558Q9Y6Z2 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC1.73□□□□□ -2.13
LINC01558Q9Y6Z2 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
LINC01558Q9Y6Z2 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC1.73□□□□□ -2.13
LINC01558Q9Y6Z2 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC1.73□□□□□ -2.13
LINC01558Q9Y6Z2 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC1.73□□□□□ -2.13
LINC01558Q9Y6Z2 AC005726.4-201ENST00000582858 458 ntBASIC1.73□□□□□ -2.13
LINC01558Q9Y6Z2 AC083760.1-201ENST00000589621 670 ntBASIC1.73□□□□□ -2.13
LINC01558Q9Y6Z2 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC1.73□□□□□ -2.13
LINC01558Q9Y6Z2 AC068790.7-201ENST00000602347 528 ntBASIC1.73□□□□□ -2.13
LINC01558Q9Y6Z2 AC069304.3-201ENST00000603938 1084 ntBASIC1.73□□□□□ -2.13
LINC01558Q9Y6Z2 HSPE1P14-201ENST00000605812 302 ntBASIC1.73□□□□□ -2.13
LINC01558Q9Y6Z2 AC005828.7-201ENST00000607331 556 ntBASIC1.73□□□□□ -2.13
LINC01558Q9Y6Z2 AL391834.1-201ENST00000609609 560 ntBASIC1.73□□□□□ -2.13
LINC01558Q9Y6Z2 AL162274.2-201ENST00000614406 332 ntBASIC1.73□□□□□ -2.13
LINC01558Q9Y6Z2 MIR7151-201ENST00000617477 60 ntBASIC1.73□□□□□ -2.13
LINC01558Q9Y6Z2 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC1.73□□□□□ -2.13
LINC01558Q9Y6Z2 AC006249.1-201ENST00000621223 471 ntBASIC1.73□□□□□ -2.13
LINC01558Q9Y6Z2 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
LINC01558Q9Y6Z2 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
LINC01558Q9Y6Z2 CR788268.1-201ENST00000603931 1809 ntBASIC1.73□□□□□ -2.13
LINC01558Q9Y6Z2 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC1.72□□□□□ -2.13
LINC01558Q9Y6Z2 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC1.72□□□□□ -2.13
LINC01558Q9Y6Z2 HSPA8P19-201ENST00000505359 1517 ntBASIC1.72□□□□□ -2.13
LINC01558Q9Y6Z2 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC1.72□□□□□ -2.13
LINC01558Q9Y6Z2 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
LINC01558Q9Y6Z2 RN7SKP95-201ENST00000362860 303 ntBASIC1.72□□□□□ -2.13
LINC01558Q9Y6Z2 DEFB109C-201ENST00000382575 264 ntBASIC1.72□□□□□ -2.13
LINC01558Q9Y6Z2 DEFB109B-201ENST00000382656 264 ntBASIC1.72□□□□□ -2.13
LINC01558Q9Y6Z2 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
LINC01558Q9Y6Z2 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
LINC01558Q9Y6Z2 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
LINC01558Q9Y6Z2 RNA5SP397-201ENST00000391323 118 ntBASIC1.72□□□□□ -2.13
LINC01558Q9Y6Z2 CCL7-202ENST00000394627 696 ntTSL 3 BASIC1.72□□□□□ -2.13
LINC01558Q9Y6Z2 RPS16P5-201ENST00000406501 404 ntBASIC1.72□□□□□ -2.13
LINC01558Q9Y6Z2 RNU2-5P-201ENST00000410533 180 ntBASIC1.72□□□□□ -2.13
LINC01558Q9Y6Z2 HSPE1P12-201ENST00000412576 301 ntBASIC1.72□□□□□ -2.13
LINC01558Q9Y6Z2 OR52N3P-201ENST00000413417 934 ntBASIC1.72□□□□□ -2.13
LINC01558Q9Y6Z2 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC1.72□□□□□ -2.13
LINC01558Q9Y6Z2 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC1.72□□□□□ -2.13
LINC01558Q9Y6Z2 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC1.72□□□□□ -2.13
LINC01558Q9Y6Z2 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC1.72□□□□□ -2.13
LINC01558Q9Y6Z2 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC1.72□□□□□ -2.13
LINC01558Q9Y6Z2 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC1.72□□□□□ -2.13
LINC01558Q9Y6Z2 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
LINC01558Q9Y6Z2 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC1.72□□□□□ -2.13
LINC01558Q9Y6Z2 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC1.72□□□□□ -2.13
LINC01558Q9Y6Z2 RPL5P24-201ENST00000463742 885 ntBASIC1.72□□□□□ -2.13
LINC01558Q9Y6Z2 RN7SL798P-201ENST00000468562 301 ntBASIC1.72□□□□□ -2.13
LINC01558Q9Y6Z2 APOPT1-206ENST00000476323 757 ntTSL 5 BASIC1.72□□□□□ -2.13
LINC01558Q9Y6Z2 RPL7P39-201ENST00000481157 744 ntBASIC1.72□□□□□ -2.13
LINC01558Q9Y6Z2 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC1.72□□□□□ -2.13
LINC01558Q9Y6Z2 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC1.72□□□□□ -2.13
LINC01558Q9Y6Z2 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC1.72□□□□□ -2.13
LINC01558Q9Y6Z2 FCF1P8-201ENST00000510322 597 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms