Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
PCDHGA1Q9Y5H4 VN1R105P-201ENST00000486595 910 ntBASIC4.19□□□□□ -1.74
PCDHGA1Q9Y5H4 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.19□□□□□ -1.74
PCDHGA1Q9Y5H4 NPM1P41-201ENST00000512920 831 ntBASIC4.19□□□□□ -1.74
PCDHGA1Q9Y5H4 PRELID3BP4-201ENST00000515476 571 ntBASIC4.19□□□□□ -1.74
PCDHGA1Q9Y5H4 MTND2P26-201ENST00000528255 1029 ntBASIC4.19□□□□□ -1.74
PCDHGA1Q9Y5H4 AP003066.2-201ENST00000529375 555 ntBASIC4.19□□□□□ -1.74
PCDHGA1Q9Y5H4 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.19□□□□□ -1.74
PCDHGA1Q9Y5H4 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PCDHGA1Q9Y5H4 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.19□□□□□ -1.74
PCDHGA1Q9Y5H4 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PCDHGA1Q9Y5H4 AC068620.3-201ENST00000602749 560 ntBASIC4.19□□□□□ -1.74
PCDHGA1Q9Y5H4 AC113194.1-201ENST00000606037 500 ntBASIC4.19□□□□□ -1.74
PCDHGA1Q9Y5H4 MIR6875-201ENST00000617506 72 ntBASIC4.19□□□□□ -1.74
PCDHGA1Q9Y5H4 AL713922.2-201ENST00000619384 716 ntBASIC4.19□□□□□ -1.74
PCDHGA1Q9Y5H4 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
PCDHGA1Q9Y5H4 RNU6-156P-201ENST00000621869 107 ntBASIC4.19□□□□□ -1.74
PCDHGA1Q9Y5H4 C2orf27A-204ENST00000623058 969 ntBASIC4.19□□□□□ -1.74
PCDHGA1Q9Y5H4 AC010872.1-201ENST00000624225 675 ntBASIC4.19□□□□□ -1.74
PCDHGA1Q9Y5H4 AC010608.2-201ENST00000624830 470 ntBASIC4.19□□□□□ -1.74
PCDHGA1Q9Y5H4 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC4.19□□□□□ -1.74
PCDHGA1Q9Y5H4 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
PCDHGA1Q9Y5H4 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.19□□□□□ -1.74
PCDHGA1Q9Y5H4 AC107081.3-201ENST00000612715 2034 ntBASIC4.19□□□□□ -1.74
PCDHGA1Q9Y5H4 AC008725.1-201ENST00000605123 2263 ntBASIC4.19□□□□□ -1.74
PCDHGA1Q9Y5H4 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
PCDHGA1Q9Y5H4 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
PCDHGA1Q9Y5H4 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PCDHGA1Q9Y5H4 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PCDHGA1Q9Y5H4 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.18□□□□□ -1.74
PCDHGA1Q9Y5H4 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
PCDHGA1Q9Y5H4 RNA5SP175-201ENST00000364275 119 ntBASIC4.18□□□□□ -1.74
PCDHGA1Q9Y5H4 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
PCDHGA1Q9Y5H4 RNU6-1257P-201ENST00000384625 110 ntBASIC4.18□□□□□ -1.74
PCDHGA1Q9Y5H4 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
PCDHGA1Q9Y5H4 EIF5P1-201ENST00000400019 1231 ntBASIC4.18□□□□□ -1.74
PCDHGA1Q9Y5H4 RN7SKP182-201ENST00000410772 298 ntBASIC4.18□□□□□ -1.74
PCDHGA1Q9Y5H4 NRBF2P2-201ENST00000413087 861 ntBASIC4.18□□□□□ -1.74
PCDHGA1Q9Y5H4 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.18□□□□□ -1.74
PCDHGA1Q9Y5H4 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.18□□□□□ -1.74
PCDHGA1Q9Y5H4 RPL7P53-201ENST00000421245 739 ntBASIC4.18□□□□□ -1.74
PCDHGA1Q9Y5H4 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.18□□□□□ -1.74
PCDHGA1Q9Y5H4 COX6B1P7-201ENST00000430845 235 ntBASIC4.18□□□□□ -1.74
PCDHGA1Q9Y5H4 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC4.18□□□□□ -1.74
PCDHGA1Q9Y5H4 AL929288.2-201ENST00000446368 407 ntBASIC4.18□□□□□ -1.74
PCDHGA1Q9Y5H4 RPS27AP15-201ENST00000447672 466 ntBASIC4.18□□□□□ -1.74
PCDHGA1Q9Y5H4 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC4.18□□□□□ -1.74
PCDHGA1Q9Y5H4 BX276092.4-201ENST00000452056 248 ntBASIC4.18□□□□□ -1.74
PCDHGA1Q9Y5H4 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC4.18□□□□□ -1.74
PCDHGA1Q9Y5H4 AC091564.1-201ENST00000464563 479 ntBASIC4.18□□□□□ -1.74
PCDHGA1Q9Y5H4 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PCDHGA1Q9Y5H4 DEFB109F-201ENST00000491870 277 ntBASIC4.18□□□□□ -1.74
PCDHGA1Q9Y5H4 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.18□□□□□ -1.74
PCDHGA1Q9Y5H4 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PCDHGA1Q9Y5H4 RN7SKP277-201ENST00000516895 283 ntBASIC4.18□□□□□ -1.74
PCDHGA1Q9Y5H4 OR5BC1P-201ENST00000529327 739 ntBASIC4.18□□□□□ -1.74
PCDHGA1Q9Y5H4 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.18□□□□□ -1.74
PCDHGA1Q9Y5H4 MIR3944-201ENST00000581277 108 ntBASIC4.18□□□□□ -1.74
PCDHGA1Q9Y5H4 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.18□□□□□ -1.74
PCDHGA1Q9Y5H4 VN1R79P-201ENST00000593540 513 ntBASIC4.18□□□□□ -1.74
PCDHGA1Q9Y5H4 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC4.18□□□□□ -1.74
PCDHGA1Q9Y5H4 RPL7P50-201ENST00000600588 727 ntBASIC4.18□□□□□ -1.74
PCDHGA1Q9Y5H4 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.18□□□□□ -1.74
PCDHGA1Q9Y5H4 AC018645.2-201ENST00000609151 472 ntBASIC4.18□□□□□ -1.74
PCDHGA1Q9Y5H4 AC078899.5-201ENST00000612475 178 ntBASIC4.18□□□□□ -1.74
PCDHGA1Q9Y5H4 AL021997.2-201ENST00000615674 271 ntBASIC4.18□□□□□ -1.74
PCDHGA1Q9Y5H4 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC4.18□□□□□ -1.74
PCDHGA1Q9Y5H4 AC112200.1-201ENST00000625015 234 ntBASIC4.18□□□□□ -1.74
PCDHGA1Q9Y5H4 AC106871.1-201ENST00000568324 3102 ntBASIC4.18□□□□□ -1.74
PCDHGA1Q9Y5H4 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
PCDHGA1Q9Y5H4 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PCDHGA1Q9Y5H4 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PCDHGA1Q9Y5H4 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PCDHGA1Q9Y5H4 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.17□□□□□ -1.74
PCDHGA1Q9Y5H4 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
PCDHGA1Q9Y5H4 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.17□□□□□ -1.74
PCDHGA1Q9Y5H4 AC090337.1-201ENST00000579651 2074 ntBASIC4.17□□□□□ -1.74
PCDHGA1Q9Y5H4 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.17□□□□□ -1.74
PCDHGA1Q9Y5H4 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
PCDHGA1Q9Y5H4 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.17□□□□□ -1.74
PCDHGA1Q9Y5H4 RNA5SP130-201ENST00000364431 114 ntBASIC4.17□□□□□ -1.74
PCDHGA1Q9Y5H4 MIR3074-201ENST00000384885 81 ntBASIC4.17□□□□□ -1.74
PCDHGA1Q9Y5H4 RNU6-932P-201ENST00000391108 106 ntBASIC4.17□□□□□ -1.74
PCDHGA1Q9Y5H4 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC4.17□□□□□ -1.74
PCDHGA1Q9Y5H4 AL024507.1-201ENST00000412741 274 ntBASIC4.17□□□□□ -1.74
PCDHGA1Q9Y5H4 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.17□□□□□ -1.74
PCDHGA1Q9Y5H4 AC062016.2-201ENST00000420950 676 ntBASIC4.17□□□□□ -1.74
PCDHGA1Q9Y5H4 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC4.17□□□□□ -1.74
PCDHGA1Q9Y5H4 OR8F1P-201ENST00000425243 930 ntBASIC4.17□□□□□ -1.74
PCDHGA1Q9Y5H4 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.17□□□□□ -1.74
PCDHGA1Q9Y5H4 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.17□□□□□ -1.74
PCDHGA1Q9Y5H4 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC4.17□□□□□ -1.74
PCDHGA1Q9Y5H4 AL592437.1-201ENST00000443781 492 ntBASIC4.17□□□□□ -1.74
PCDHGA1Q9Y5H4 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.17□□□□□ -1.74
PCDHGA1Q9Y5H4 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.17□□□□□ -1.74
PCDHGA1Q9Y5H4 AL121877.1-201ENST00000453704 622 ntBASIC4.17□□□□□ -1.74
PCDHGA1Q9Y5H4 RPL37P6-202ENST00000464216 403 ntBASIC4.17□□□□□ -1.74
PCDHGA1Q9Y5H4 AC087385.1-201ENST00000475062 312 ntBASIC4.17□□□□□ -1.74
PCDHGA1Q9Y5H4 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC4.17□□□□□ -1.74
PCDHGA1Q9Y5H4 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms