Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.44□□□□□ -1.7
SIX4Q9UIU6 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.44□□□□□ -1.7
SIX4Q9UIU6 TPT1P2-201ENST00000413105 503 ntBASIC4.44□□□□□ -1.7
SIX4Q9UIU6 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.44□□□□□ -1.7
SIX4Q9UIU6 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC4.44□□□□□ -1.7
SIX4Q9UIU6 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.44□□□□□ -1.7
SIX4Q9UIU6 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.44□□□□□ -1.7
SIX4Q9UIU6 RPS27AP12-201ENST00000429552 465 ntBASIC4.44□□□□□ -1.7
SIX4Q9UIU6 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.44□□□□□ -1.7
SIX4Q9UIU6 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC4.44□□□□□ -1.7
SIX4Q9UIU6 SETP8-201ENST00000435341 628 ntBASIC4.44□□□□□ -1.7
SIX4Q9UIU6 SETD6P1-201ENST00000444575 317 ntBASIC4.44□□□□□ -1.7
SIX4Q9UIU6 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC4.44□□□□□ -1.7
SIX4Q9UIU6 PTENP1-201ENST00000447117 1215 ntBASIC4.44□□□□□ -1.7
SIX4Q9UIU6 AC005002.1-201ENST00000447458 540 ntBASIC4.44□□□□□ -1.7
SIX4Q9UIU6 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.44□□□□□ -1.7
SIX4Q9UIU6 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC4.44□□□□□ -1.7
SIX4Q9UIU6 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.44□□□□□ -1.7
SIX4Q9UIU6 HPRT1P2-201ENST00000505250 544 ntBASIC4.44□□□□□ -1.7
SIX4Q9UIU6 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC4.44□□□□□ -1.7
SIX4Q9UIU6 MTCO1P35-201ENST00000515270 228 ntBASIC4.44□□□□□ -1.7
SIX4Q9UIU6 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.44□□□□□ -1.7
SIX4Q9UIU6 MTCO3P15-201ENST00000526563 574 ntBASIC4.44□□□□□ -1.7
SIX4Q9UIU6 PDCD5P1-201ENST00000543528 309 ntBASIC4.44□□□□□ -1.7
SIX4Q9UIU6 ZNF321P-202ENST00000550843 495 ntBASIC4.44□□□□□ -1.7
SIX4Q9UIU6 AC009094.1-201ENST00000564443 426 ntBASIC4.44□□□□□ -1.7
SIX4Q9UIU6 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC4.44□□□□□ -1.7
SIX4Q9UIU6 AC125494.3-201ENST00000602759 455 ntBASIC4.44□□□□□ -1.7
SIX4Q9UIU6 AL353778.1-201ENST00000603149 408 ntBASIC4.44□□□□□ -1.7
SIX4Q9UIU6 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.44□□□□□ -1.7
SIX4Q9UIU6 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.44□□□□□ -1.7
SIX4Q9UIU6 AC024595.1-201ENST00000623088 387 ntBASIC4.44□□□□□ -1.7
SIX4Q9UIU6 AC016717.3-201ENST00000624730 554 ntBASIC4.44□□□□□ -1.7
SIX4Q9UIU6 AC017037.3-201ENST00000625016 472 ntBASIC4.44□□□□□ -1.7
SIX4Q9UIU6 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC4.44□□□□□ -1.7
SIX4Q9UIU6 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.44□□□□□ -1.7
SIX4Q9UIU6 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
SIX4Q9UIU6 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SIX4Q9UIU6 ERCC6-202ENST00000374127 1782 ntBASIC4.44□□□□□ -1.7
SIX4Q9UIU6 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.44□□□□□ -1.7
SIX4Q9UIU6 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SIX4Q9UIU6 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.44□□□□□ -1.7
SIX4Q9UIU6 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.44□□□□□ -1.7
SIX4Q9UIU6 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SIX4Q9UIU6 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
SIX4Q9UIU6 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SIX4Q9UIU6 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.43□□□□□ -1.7
SIX4Q9UIU6 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
SIX4Q9UIU6 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SIX4Q9UIU6 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SIX4Q9UIU6 OR11H4-201ENST00000315409 1082 ntBASIC4.43□□□□□ -1.7
SIX4Q9UIU6 RNA5SP515-201ENST00000364570 118 ntBASIC4.43□□□□□ -1.7
SIX4Q9UIU6 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC4.43□□□□□ -1.7
SIX4Q9UIU6 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.43□□□□□ -1.7
SIX4Q9UIU6 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SIX4Q9UIU6 AC027644.1-201ENST00000419595 298 ntBASIC4.43□□□□□ -1.7
SIX4Q9UIU6 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SIX4Q9UIU6 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SIX4Q9UIU6 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.43□□□□□ -1.7
SIX4Q9UIU6 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.43□□□□□ -1.7
SIX4Q9UIU6 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC4.43□□□□□ -1.7
SIX4Q9UIU6 AL353597.2-202ENST00000434901 373 ntBASIC4.43□□□□□ -1.7
SIX4Q9UIU6 HLA-N-201ENST00000437516 135 ntBASIC4.43□□□□□ -1.7
SIX4Q9UIU6 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SIX4Q9UIU6 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.43□□□□□ -1.7
SIX4Q9UIU6 Z83846.1-201ENST00000446798 265 ntBASIC4.43□□□□□ -1.7
SIX4Q9UIU6 AC114755.5-201ENST00000447760 831 ntBASIC4.43□□□□□ -1.7
SIX4Q9UIU6 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.43□□□□□ -1.7
SIX4Q9UIU6 AC243772.1-201ENST00000451620 410 ntBASIC4.43□□□□□ -1.7
SIX4Q9UIU6 RAD23BP3-201ENST00000454157 1152 ntBASIC4.43□□□□□ -1.7
SIX4Q9UIU6 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC4.43□□□□□ -1.7
SIX4Q9UIU6 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC4.43□□□□□ -1.7
SIX4Q9UIU6 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC4.43□□□□□ -1.7
SIX4Q9UIU6 RPS26P28-201ENST00000470806 348 ntBASIC4.43□□□□□ -1.7
SIX4Q9UIU6 RPL23AP44-201ENST00000482216 473 ntBASIC4.43□□□□□ -1.7
SIX4Q9UIU6 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.43□□□□□ -1.7
SIX4Q9UIU6 PPBPP1-201ENST00000510807 373 ntBASIC4.43□□□□□ -1.7
SIX4Q9UIU6 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC4.43□□□□□ -1.7
SIX4Q9UIU6 AC023050.2-201ENST00000544968 387 ntBASIC4.43□□□□□ -1.7
SIX4Q9UIU6 DUXAP6-201ENST00000553858 601 ntBASIC4.43□□□□□ -1.7
SIX4Q9UIU6 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.43□□□□□ -1.7
SIX4Q9UIU6 VN1R83P-201ENST00000595685 445 ntBASIC4.43□□□□□ -1.7
SIX4Q9UIU6 AL583856.2-201ENST00000606298 543 ntBASIC4.43□□□□□ -1.7
SIX4Q9UIU6 AC010857.1-201ENST00000606398 594 ntBASIC4.43□□□□□ -1.7
SIX4Q9UIU6 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.43□□□□□ -1.7
SIX4Q9UIU6 AC023043.4-201ENST00000612081 449 ntBASIC4.43□□□□□ -1.7
SIX4Q9UIU6 AC024257.5-201ENST00000612739 531 ntBASIC4.43□□□□□ -1.7
SIX4Q9UIU6 AL731566.2-201ENST00000618971 317 ntBASIC4.43□□□□□ -1.7
SIX4Q9UIU6 AL158163.2-201ENST00000619110 700 ntBASIC4.43□□□□□ -1.7
SIX4Q9UIU6 VN1R7P-201ENST00000619242 903 ntBASIC4.43□□□□□ -1.7
SIX4Q9UIU6 AP002782.1-201ENST00000623107 614 ntBASIC4.43□□□□□ -1.7
SIX4Q9UIU6 AC079416.3-201ENST00000624479 549 ntBASIC4.43□□□□□ -1.7
SIX4Q9UIU6 AC068724.3-201ENST00000625906 87 ntBASIC4.43□□□□□ -1.7
SIX4Q9UIU6 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.43□□□□□ -1.7
SIX4Q9UIU6 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
SIX4Q9UIU6 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
SIX4Q9UIU6 LINC02211-204ENST00000642024 1070 ntBASIC4.43□□□□□ -1.7
SIX4Q9UIU6 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.43□□□□□ -1.7
SIX4Q9UIU6 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SIX4Q9UIU6 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms