Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 OR8B1P-202ENST00000641132 1178 ntBASIC4.52□□□□□ -1.69
CLIP2Q9UDT6 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.52□□□□□ -1.69
CLIP2Q9UDT6 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.52□□□□□ -1.69
CLIP2Q9UDT6 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
CLIP2Q9UDT6 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CLIP2Q9UDT6 RNU1-18P-201ENST00000363062 164 ntBASIC4.51□□□□□ -1.69
CLIP2Q9UDT6 MIR670-201ENST00000390142 98 ntBASIC4.51□□□□□ -1.69
CLIP2Q9UDT6 HMGN2P8-201ENST00000391458 268 ntBASIC4.51□□□□□ -1.69
CLIP2Q9UDT6 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.51□□□□□ -1.69
CLIP2Q9UDT6 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CLIP2Q9UDT6 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.51□□□□□ -1.69
CLIP2Q9UDT6 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC4.51□□□□□ -1.69
CLIP2Q9UDT6 NPM1P34-201ENST00000428821 893 ntBASIC4.51□□□□□ -1.69
CLIP2Q9UDT6 RPL34P26-201ENST00000445636 354 ntBASIC4.51□□□□□ -1.69
CLIP2Q9UDT6 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC4.51□□□□□ -1.69
CLIP2Q9UDT6 EXTL2P1-201ENST00000446218 416 ntBASIC4.51□□□□□ -1.69
CLIP2Q9UDT6 RN7SL93P-201ENST00000463035 293 ntBASIC4.51□□□□□ -1.69
CLIP2Q9UDT6 HESX1-202ENST00000473921 757 ntTSL 5 BASIC4.51□□□□□ -1.69
CLIP2Q9UDT6 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.51□□□□□ -1.69
CLIP2Q9UDT6 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.51□□□□□ -1.69
CLIP2Q9UDT6 AC025459.1-201ENST00000504072 156 ntBASIC4.51□□□□□ -1.69
CLIP2Q9UDT6 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC4.51□□□□□ -1.69
CLIP2Q9UDT6 AC005798.1-201ENST00000513715 387 ntBASIC4.51□□□□□ -1.69
CLIP2Q9UDT6 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC4.51□□□□□ -1.69
CLIP2Q9UDT6 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC4.51□□□□□ -1.69
CLIP2Q9UDT6 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.51□□□□□ -1.69
CLIP2Q9UDT6 NOP56P3-201ENST00000549457 385 ntBASIC4.51□□□□□ -1.69
CLIP2Q9UDT6 MIR4444-1-201ENST00000581696 74 ntBASIC4.51□□□□□ -1.69
CLIP2Q9UDT6 MIR4444-2-201ENST00000584390 74 ntBASIC4.51□□□□□ -1.69
CLIP2Q9UDT6 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.51□□□□□ -1.69
CLIP2Q9UDT6 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.51□□□□□ -1.69
CLIP2Q9UDT6 AL355816.1-201ENST00000607951 118 ntBASIC4.51□□□□□ -1.69
CLIP2Q9UDT6 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.51□□□□□ -1.69
CLIP2Q9UDT6 MIR7973-1-201ENST00000614683 76 ntBASIC4.51□□□□□ -1.69
CLIP2Q9UDT6 AC025016.1-201ENST00000616746 682 ntBASIC4.51□□□□□ -1.69
CLIP2Q9UDT6 AC006213.5-201ENST00000619673 288 ntBASIC4.51□□□□□ -1.69
CLIP2Q9UDT6 C2orf27A-204ENST00000623058 969 ntBASIC4.51□□□□□ -1.69
CLIP2Q9UDT6 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.51□□□□□ -1.69
CLIP2Q9UDT6 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.51□□□□□ -1.69
CLIP2Q9UDT6 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CLIP2Q9UDT6 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.51□□□□□ -1.69
CLIP2Q9UDT6 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
CLIP2Q9UDT6 MTND4P10-201ENST00000446199 1363 ntBASIC4.51□□□□□ -1.69
CLIP2Q9UDT6 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
CLIP2Q9UDT6 EXOC5P1-201ENST00000510543 1969 ntBASIC4.51□□□□□ -1.69
CLIP2Q9UDT6 UBE3AP2-201ENST00000429033 2259 ntBASIC4.51□□□□□ -1.69
CLIP2Q9UDT6 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
CLIP2Q9UDT6 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.5□□□□□ -1.69
CLIP2Q9UDT6 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CLIP2Q9UDT6 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CLIP2Q9UDT6 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.5□□□□□ -1.69
CLIP2Q9UDT6 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CLIP2Q9UDT6 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CLIP2Q9UDT6 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.5□□□□□ -1.69
CLIP2Q9UDT6 SNORD115-48-201ENST00000364764 76 ntBASIC4.5□□□□□ -1.69
CLIP2Q9UDT6 SNORA73.2-201ENST00000364946 201 ntBASIC4.5□□□□□ -1.69
CLIP2Q9UDT6 U3.15-201ENST00000365398 212 ntBASIC4.5□□□□□ -1.69
CLIP2Q9UDT6 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.5□□□□□ -1.69
CLIP2Q9UDT6 MIR200C-201ENST00000384980 68 ntBASIC4.5□□□□□ -1.69
CLIP2Q9UDT6 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
CLIP2Q9UDT6 RNA5SP171-201ENST00000391071 115 ntBASIC4.5□□□□□ -1.69
CLIP2Q9UDT6 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CLIP2Q9UDT6 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.5□□□□□ -1.69
CLIP2Q9UDT6 AC105402.1-201ENST00000413336 545 ntBASIC4.5□□□□□ -1.69
CLIP2Q9UDT6 AL139247.1-201ENST00000422768 325 ntBASIC4.5□□□□□ -1.69
CLIP2Q9UDT6 RPL30P3-201ENST00000424262 333 ntBASIC4.5□□□□□ -1.69
CLIP2Q9UDT6 AL591419.1-201ENST00000427423 339 ntBASIC4.5□□□□□ -1.69
CLIP2Q9UDT6 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.5□□□□□ -1.69
CLIP2Q9UDT6 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CLIP2Q9UDT6 OR52A4P-202ENST00000481634 799 ntBASIC4.5□□□□□ -1.69
CLIP2Q9UDT6 RPL7P24-201ENST00000493052 752 ntBASIC4.5□□□□□ -1.69
CLIP2Q9UDT6 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
CLIP2Q9UDT6 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC4.5□□□□□ -1.69
CLIP2Q9UDT6 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.5□□□□□ -1.69
CLIP2Q9UDT6 IGKV2D-23-201ENST00000518179 286 ntBASIC4.5□□□□□ -1.69
CLIP2Q9UDT6 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.5□□□□□ -1.69
CLIP2Q9UDT6 AC091515.1-201ENST00000548110 679 ntBASIC4.5□□□□□ -1.69
CLIP2Q9UDT6 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.5□□□□□ -1.69
CLIP2Q9UDT6 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.5□□□□□ -1.69
CLIP2Q9UDT6 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.5□□□□□ -1.69
CLIP2Q9UDT6 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.5□□□□□ -1.69
CLIP2Q9UDT6 AC005242.1-201ENST00000585658 438 ntBASIC4.5□□□□□ -1.69
CLIP2Q9UDT6 AC090525.3-201ENST00000605601 189 ntBASIC4.5□□□□□ -1.69
CLIP2Q9UDT6 AC015849.2-201ENST00000605738 409 ntBASIC4.5□□□□□ -1.69
CLIP2Q9UDT6 AC026790.2-201ENST00000606282 430 ntBASIC4.5□□□□□ -1.69
CLIP2Q9UDT6 AL355802.4-201ENST00000607635 548 ntBASIC4.5□□□□□ -1.69
CLIP2Q9UDT6 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.5□□□□□ -1.69
CLIP2Q9UDT6 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC4.5□□□□□ -1.69
CLIP2Q9UDT6 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.5□□□□□ -1.69
CLIP2Q9UDT6 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CLIP2Q9UDT6 HSPA8P1-201ENST00000425843 1833 ntBASIC4.5□□□□□ -1.69
CLIP2Q9UDT6 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.5□□□□□ -1.69
CLIP2Q9UDT6 LINC00561-201ENST00000565815 2738 ntBASIC4.5□□□□□ -1.69
CLIP2Q9UDT6 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.5□□□□□ -1.69
CLIP2Q9UDT6 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
CLIP2Q9UDT6 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CLIP2Q9UDT6 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.49□□□□□ -1.69
CLIP2Q9UDT6 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.49□□□□□ -1.69
CLIP2Q9UDT6 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CLIP2Q9UDT6 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms