Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC3.09□□□□□ -1.92
KIAA1549Q9HCM3 RNA5SP120-201ENST00000410900 112 ntBASIC3.09□□□□□ -1.92
KIAA1549Q9HCM3 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.09□□□□□ -1.92
KIAA1549Q9HCM3 AC097713.2-201ENST00000430199 356 ntBASIC3.09□□□□□ -1.92
KIAA1549Q9HCM3 AC091862.1-201ENST00000438016 1100 ntBASIC3.09□□□□□ -1.92
KIAA1549Q9HCM3 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.09□□□□□ -1.92
KIAA1549Q9HCM3 MTND6P6-201ENST00000478031 263 ntBASIC3.09□□□□□ -1.92
KIAA1549Q9HCM3 AC112198.1-201ENST00000505369 1220 ntBASIC3.09□□□□□ -1.92
KIAA1549Q9HCM3 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.92
KIAA1549Q9HCM3 FCF1P8-201ENST00000510322 597 ntBASIC3.09□□□□□ -1.92
KIAA1549Q9HCM3 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.09□□□□□ -1.92
KIAA1549Q9HCM3 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC3.09□□□□□ -1.92
KIAA1549Q9HCM3 ARL2BPP6-201ENST00000512757 439 ntBASIC3.09□□□□□ -1.92
KIAA1549Q9HCM3 RN7SKP5-201ENST00000517045 272 ntBASIC3.09□□□□□ -1.92
KIAA1549Q9HCM3 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3.09□□□□□ -1.92
KIAA1549Q9HCM3 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.09□□□□□ -1.92
KIAA1549Q9HCM3 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC3.09□□□□□ -1.92
KIAA1549Q9HCM3 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.09□□□□□ -1.92
KIAA1549Q9HCM3 AC125494.3-201ENST00000602759 455 ntBASIC3.09□□□□□ -1.92
KIAA1549Q9HCM3 OR2BH1P-201ENST00000608850 864 ntBASIC3.09□□□□□ -1.92
KIAA1549Q9HCM3 AC096586.2-201ENST00000610260 441 ntBASIC3.09□□□□□ -1.92
KIAA1549Q9HCM3 uc_338.32-201ENST00000615087 172 ntBASIC3.09□□□□□ -1.92
KIAA1549Q9HCM3 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
KIAA1549Q9HCM3 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.08□□□□□ -1.92
KIAA1549Q9HCM3 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
KIAA1549Q9HCM3 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
KIAA1549Q9HCM3 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
KIAA1549Q9HCM3 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
KIAA1549Q9HCM3 AL133383.2-201ENST00000622958 2336 ntBASIC3.08□□□□□ -1.92
KIAA1549Q9HCM3 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.08□□□□□ -1.92
KIAA1549Q9HCM3 MIR3074-201ENST00000384885 81 ntBASIC3.08□□□□□ -1.92
KIAA1549Q9HCM3 AL034403.1-201ENST00000399414 885 ntBASIC3.08□□□□□ -1.92
KIAA1549Q9HCM3 RHEBP3-201ENST00000411920 351 ntBASIC3.08□□□□□ -1.92
KIAA1549Q9HCM3 AMD1P2-201ENST00000412936 992 ntBASIC3.08□□□□□ -1.92
KIAA1549Q9HCM3 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.08□□□□□ -1.92
KIAA1549Q9HCM3 AL158156.1-201ENST00000422509 473 ntBASIC3.08□□□□□ -1.92
KIAA1549Q9HCM3 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.08□□□□□ -1.92
KIAA1549Q9HCM3 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC3.08□□□□□ -1.92
KIAA1549Q9HCM3 PCBP2P3-201ENST00000509726 843 ntBASIC3.08□□□□□ -1.92
KIAA1549Q9HCM3 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.08□□□□□ -1.92
KIAA1549Q9HCM3 IGKV2-26-201ENST00000518305 343 ntBASIC3.08□□□□□ -1.92
KIAA1549Q9HCM3 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.08□□□□□ -1.92
KIAA1549Q9HCM3 MIR8057-201ENST00000620957 69 ntBASIC3.08□□□□□ -1.92
KIAA1549Q9HCM3 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.08□□□□□ -1.92
KIAA1549Q9HCM3 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
KIAA1549Q9HCM3 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
KIAA1549Q9HCM3 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
KIAA1549Q9HCM3 AC090971.4-201ENST00000560291 1800 ntBASIC3.08□□□□□ -1.92
KIAA1549Q9HCM3 RNU6-178P-201ENST00000384631 104 ntBASIC3.07□□□□□ -1.92
KIAA1549Q9HCM3 SNORA48.2-201ENST00000390926 124 ntBASIC3.07□□□□□ -1.92
KIAA1549Q9HCM3 AC096664.2-201ENST00000411843 406 ntBASIC3.07□□□□□ -1.92
KIAA1549Q9HCM3 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.07□□□□□ -1.92
KIAA1549Q9HCM3 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC3.07□□□□□ -1.92
KIAA1549Q9HCM3 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
KIAA1549Q9HCM3 MRPS18BP2-201ENST00000434310 759 ntBASIC3.07□□□□□ -1.92
KIAA1549Q9HCM3 SKP1P1-201ENST00000438081 489 ntBASIC3.07□□□□□ -1.92
KIAA1549Q9HCM3 MTND4LP12-201ENST00000448237 295 ntBASIC3.07□□□□□ -1.92
KIAA1549Q9HCM3 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.07□□□□□ -1.92
KIAA1549Q9HCM3 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.07□□□□□ -1.92
KIAA1549Q9HCM3 AC010285.3-201ENST00000511668 676 ntBASIC3.07□□□□□ -1.92
KIAA1549Q9HCM3 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.07□□□□□ -1.92
KIAA1549Q9HCM3 AP000926.4-201ENST00000527351 454 ntBASIC3.07□□□□□ -1.92
KIAA1549Q9HCM3 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.07□□□□□ -1.92
KIAA1549Q9HCM3 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC3.07□□□□□ -1.92
KIAA1549Q9HCM3 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.07□□□□□ -1.92
KIAA1549Q9HCM3 AP001002.2-201ENST00000625137 386 ntBASIC3.07□□□□□ -1.92
KIAA1549Q9HCM3 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.07□□□□□ -1.92
KIAA1549Q9HCM3 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
KIAA1549Q9HCM3 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
KIAA1549Q9HCM3 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
KIAA1549Q9HCM3 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
KIAA1549Q9HCM3 AL357075.1-201ENST00000404107 726 ntBASIC3.07□□□□□ -1.92
KIAA1549Q9HCM3 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.07□□□□□ -1.92
KIAA1549Q9HCM3 AC063979.1-201ENST00000415539 377 ntBASIC3.07□□□□□ -1.92
KIAA1549Q9HCM3 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.07□□□□□ -1.92
KIAA1549Q9HCM3 RPS26P47-201ENST00000427219 348 ntBASIC3.07□□□□□ -1.92
KIAA1549Q9HCM3 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
KIAA1549Q9HCM3 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC3.07□□□□□ -1.92
KIAA1549Q9HCM3 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.07□□□□□ -1.92
KIAA1549Q9HCM3 RPL7P38-201ENST00000488396 739 ntBASIC3.07□□□□□ -1.92
KIAA1549Q9HCM3 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC3.07□□□□□ -1.92
KIAA1549Q9HCM3 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.07□□□□□ -1.92
KIAA1549Q9HCM3 SNORA70.24-201ENST00000517233 118 ntBASIC3.07□□□□□ -1.92
KIAA1549Q9HCM3 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.07□□□□□ -1.92
KIAA1549Q9HCM3 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.07□□□□□ -1.92
KIAA1549Q9HCM3 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.07□□□□□ -1.92
KIAA1549Q9HCM3 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.07□□□□□ -1.92
KIAA1549Q9HCM3 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.07□□□□□ -1.92
KIAA1549Q9HCM3 AC009101.1-201ENST00000568135 242 ntBASIC3.07□□□□□ -1.92
KIAA1549Q9HCM3 AC015911.5-201ENST00000587076 451 ntBASIC3.07□□□□□ -1.92
KIAA1549Q9HCM3 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.07□□□□□ -1.92
KIAA1549Q9HCM3 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.07□□□□□ -1.92
KIAA1549Q9HCM3 AC068647.1-201ENST00000489539 2265 ntBASIC3.06□□□□□ -1.92
KIAA1549Q9HCM3 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
KIAA1549Q9HCM3 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.06□□□□□ -1.92
KIAA1549Q9HCM3 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
KIAA1549Q9HCM3 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
KIAA1549Q9HCM3 AL136131.1-201ENST00000406079 803 ntBASIC3.06□□□□□ -1.92
KIAA1549Q9HCM3 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.06□□□□□ -1.92
KIAA1549Q9HCM3 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms