Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
H3F3CQ6NXT2 EXOC5P1-201ENST00000510543 1969 ntBASIC3.6□□□□□ -1.83
H3F3CQ6NXT2 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
H3F3CQ6NXT2 AC015813.6-201ENST00000624409 5808 ntBASIC3.6□□□□□ -1.83
H3F3CQ6NXT2 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
H3F3CQ6NXT2 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
H3F3CQ6NXT2 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC3.6□□□□□ -1.83
H3F3CQ6NXT2 SNORA70E-201ENST00000384492 135 ntBASIC3.6□□□□□ -1.83
H3F3CQ6NXT2 MIR199A2-201ENST00000385289 110 ntBASIC3.6□□□□□ -1.83
H3F3CQ6NXT2 AL590704.1-201ENST00000402856 794 ntBASIC3.6□□□□□ -1.83
H3F3CQ6NXT2 SNORA57.3-201ENST00000411095 141 ntBASIC3.6□□□□□ -1.83
H3F3CQ6NXT2 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.6□□□□□ -1.83
H3F3CQ6NXT2 AL035246.1-201ENST00000433554 1255 ntBASIC3.6□□□□□ -1.83
H3F3CQ6NXT2 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
H3F3CQ6NXT2 HMGB1P37-201ENST00000439613 609 ntBASIC3.6□□□□□ -1.83
H3F3CQ6NXT2 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.6□□□□□ -1.83
H3F3CQ6NXT2 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.6□□□□□ -1.83
H3F3CQ6NXT2 AC025459.1-201ENST00000504072 156 ntBASIC3.6□□□□□ -1.83
H3F3CQ6NXT2 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.6□□□□□ -1.83
H3F3CQ6NXT2 SLC25A15P5-201ENST00000508033 253 ntBASIC3.6□□□□□ -1.83
H3F3CQ6NXT2 AC005351.1-201ENST00000511152 786 ntBASIC3.6□□□□□ -1.83
H3F3CQ6NXT2 RNU2-58P-201ENST00000516403 183 ntBASIC3.6□□□□□ -1.83
H3F3CQ6NXT2 RNA5SP143-201ENST00000516936 115 ntBASIC3.6□□□□□ -1.83
H3F3CQ6NXT2 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.6□□□□□ -1.83
H3F3CQ6NXT2 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.6□□□□□ -1.83
H3F3CQ6NXT2 AC074050.1-201ENST00000563247 211 ntBASIC3.6□□□□□ -1.83
H3F3CQ6NXT2 MIR4429-201ENST00000580105 73 ntBASIC3.6□□□□□ -1.83
H3F3CQ6NXT2 RNA5SP108-201ENST00000605921 117 ntBASIC3.6□□□□□ -1.83
H3F3CQ6NXT2 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.6□□□□□ -1.83
H3F3CQ6NXT2 MIR486-1-201ENST00000612171 68 ntBASIC3.6□□□□□ -1.83
H3F3CQ6NXT2 AL121772.2-201ENST00000614331 297 ntBASIC3.6□□□□□ -1.83
H3F3CQ6NXT2 AC095038.2-201ENST00000621464 1070 ntBASIC3.6□□□□□ -1.83
H3F3CQ6NXT2 AL773545.4-201ENST00000637262 310 ntBASIC3.6□□□□□ -1.83
H3F3CQ6NXT2 AL513478.4-201ENST00000641636 310 ntBASIC3.6□□□□□ -1.83
H3F3CQ6NXT2 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
H3F3CQ6NXT2 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
H3F3CQ6NXT2 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.6□□□□□ -1.83
H3F3CQ6NXT2 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.6□□□□□ -1.83
H3F3CQ6NXT2 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
H3F3CQ6NXT2 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.6□□□□□ -1.83
H3F3CQ6NXT2 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
H3F3CQ6NXT2 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.59□□□□□ -1.83
H3F3CQ6NXT2 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
H3F3CQ6NXT2 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
H3F3CQ6NXT2 OR4A15-201ENST00000314706 1035 ntBASIC3.59□□□□□ -1.83
H3F3CQ6NXT2 SNORA62.3-201ENST00000365110 153 ntBASIC3.59□□□□□ -1.83
H3F3CQ6NXT2 MIR23B-201ENST00000384832 97 ntBASIC3.59□□□□□ -1.83
H3F3CQ6NXT2 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
H3F3CQ6NXT2 ZNF736P10Y-201ENST00000403990 1110 ntBASIC3.59□□□□□ -1.83
H3F3CQ6NXT2 RHEBP3-201ENST00000411920 351 ntBASIC3.59□□□□□ -1.83
H3F3CQ6NXT2 AC010385.1-201ENST00000412374 256 ntBASIC3.59□□□□□ -1.83
H3F3CQ6NXT2 RAB9AP3-201ENST00000412737 573 ntBASIC3.59□□□□□ -1.83
H3F3CQ6NXT2 RANP4-201ENST00000413361 655 ntBASIC3.59□□□□□ -1.83
H3F3CQ6NXT2 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.59□□□□□ -1.83
H3F3CQ6NXT2 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
H3F3CQ6NXT2 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.59□□□□□ -1.83
H3F3CQ6NXT2 AL389915.1-201ENST00000422463 466 ntBASIC3.59□□□□□ -1.83
H3F3CQ6NXT2 FO393419.3-201ENST00000428741 282 ntBASIC3.59□□□□□ -1.83
H3F3CQ6NXT2 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.59□□□□□ -1.83
H3F3CQ6NXT2 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.59□□□□□ -1.83
H3F3CQ6NXT2 AL356535.1-201ENST00000440335 398 ntBASIC3.59□□□□□ -1.83
H3F3CQ6NXT2 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.59□□□□□ -1.83
H3F3CQ6NXT2 RAB9AP1-201ENST00000449393 573 ntBASIC3.59□□□□□ -1.83
H3F3CQ6NXT2 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.59□□□□□ -1.83
H3F3CQ6NXT2 RPL7P15-201ENST00000461190 712 ntBASIC3.59□□□□□ -1.83
H3F3CQ6NXT2 AC091564.1-201ENST00000464563 479 ntBASIC3.59□□□□□ -1.83
H3F3CQ6NXT2 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
H3F3CQ6NXT2 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC3.59□□□□□ -1.83
H3F3CQ6NXT2 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.59□□□□□ -1.83
H3F3CQ6NXT2 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.59□□□□□ -1.83
H3F3CQ6NXT2 AC108157.1-201ENST00000510511 539 ntBASIC3.59□□□□□ -1.83
H3F3CQ6NXT2 AC093853.1-201ENST00000515689 483 ntBASIC3.59□□□□□ -1.83
H3F3CQ6NXT2 SCARNA14-201ENST00000516903 136 ntBASIC3.59□□□□□ -1.83
H3F3CQ6NXT2 IGKV2D-23-201ENST00000518179 286 ntBASIC3.59□□□□□ -1.83
H3F3CQ6NXT2 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.59□□□□□ -1.83
H3F3CQ6NXT2 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3.59□□□□□ -1.83
H3F3CQ6NXT2 CENPUP2-201ENST00000555897 1186 ntBASIC3.59□□□□□ -1.83
H3F3CQ6NXT2 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.59□□□□□ -1.83
H3F3CQ6NXT2 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
H3F3CQ6NXT2 SUMO2P14-201ENST00000604488 293 ntBASIC3.59□□□□□ -1.83
H3F3CQ6NXT2 AC112503.1-201ENST00000608436 391 ntBASIC3.59□□□□□ -1.83
H3F3CQ6NXT2 CR392039.5-201ENST00000623201 510 ntBASIC3.59□□□□□ -1.83
H3F3CQ6NXT2 ATE1-AS1-202ENST00000636460 506 ntBASIC3.59□□□□□ -1.83
H3F3CQ6NXT2 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
H3F3CQ6NXT2 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
H3F3CQ6NXT2 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC3.59□□□□□ -1.84
H3F3CQ6NXT2 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.84
H3F3CQ6NXT2 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.84
H3F3CQ6NXT2 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
H3F3CQ6NXT2 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
H3F3CQ6NXT2 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
H3F3CQ6NXT2 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
H3F3CQ6NXT2 AL359837.1-201ENST00000381357 287 ntBASIC3.58□□□□□ -1.84
H3F3CQ6NXT2 U8.11-201ENST00000384699 133 ntBASIC3.58□□□□□ -1.84
H3F3CQ6NXT2 U8.12-201ENST00000384701 133 ntBASIC3.58□□□□□ -1.84
H3F3CQ6NXT2 DNAJC19P6-201ENST00000401853 280 ntBASIC3.58□□□□□ -1.84
H3F3CQ6NXT2 Z98941.1-201ENST00000407764 100 ntBASIC3.58□□□□□ -1.84
H3F3CQ6NXT2 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.58□□□□□ -1.84
H3F3CQ6NXT2 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC3.58□□□□□ -1.84
H3F3CQ6NXT2 BMS1P19-201ENST00000433925 393 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms