Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 SAMMSON-210ENST00000641260 1308 ntBASIC5.98□□□□□ -1.45
SOX4Q06945 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SOX4Q06945 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
SOX4Q06945 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
SOX4Q06945 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
SOX4Q06945 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
SOX4Q06945 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC5.97□□□□□ -1.45
SOX4Q06945 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
SOX4Q06945 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SOX4Q06945 RN7SKP6-201ENST00000364795 319 ntBASIC5.97□□□□□ -1.45
SOX4Q06945 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.97□□□□□ -1.45
SOX4Q06945 SNORA69-201ENST00000383895 132 ntBASIC5.97□□□□□ -1.45
SOX4Q06945 Y_RNA.422-201ENST00000384054 114 ntBASIC5.97□□□□□ -1.45
SOX4Q06945 RNU6-1160P-201ENST00000384546 104 ntBASIC5.97□□□□□ -1.45
SOX4Q06945 FGFR1OP2P1-201ENST00000395943 500 ntBASIC5.97□□□□□ -1.45
SOX4Q06945 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
SOX4Q06945 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SOX4Q06945 RPS20P2-201ENST00000402520 389 ntBASIC5.97□□□□□ -1.45
SOX4Q06945 AL009179.1-201ENST00000406085 265 ntBASIC5.97□□□□□ -1.45
SOX4Q06945 AL162578.1-201ENST00000406202 378 ntBASIC5.97□□□□□ -1.45
SOX4Q06945 RNU2-8P-201ENST00000410727 190 ntBASIC5.97□□□□□ -1.45
SOX4Q06945 RNU6-1068P-201ENST00000410958 103 ntBASIC5.97□□□□□ -1.45
SOX4Q06945 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.97□□□□□ -1.45
SOX4Q06945 RPSAP35-201ENST00000413753 818 ntBASIC5.97□□□□□ -1.45
SOX4Q06945 SNRPFP1-201ENST00000414761 252 ntBASIC5.97□□□□□ -1.45
SOX4Q06945 MTATP6P18-201ENST00000417994 673 ntBASIC5.97□□□□□ -1.45
SOX4Q06945 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC5.97□□□□□ -1.45
SOX4Q06945 AC236972.2-201ENST00000434979 310 ntBASIC5.97□□□□□ -1.45
SOX4Q06945 BX679664.2-201ENST00000439282 283 ntBASIC5.97□□□□□ -1.45
SOX4Q06945 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.97□□□□□ -1.45
SOX4Q06945 RNU7-27P-201ENST00000459281 62 ntBASIC5.97□□□□□ -1.45
SOX4Q06945 AC063943.1-201ENST00000465434 453 ntBASIC5.97□□□□□ -1.45
SOX4Q06945 RN7SL51P-201ENST00000468230 285 ntBASIC5.97□□□□□ -1.45
SOX4Q06945 RN7SL799P-201ENST00000475891 298 ntBASIC5.97□□□□□ -1.45
SOX4Q06945 RPS4XP1-201ENST00000482189 787 ntBASIC5.97□□□□□ -1.45
SOX4Q06945 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC5.97□□□□□ -1.45
SOX4Q06945 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC5.97□□□□□ -1.45
SOX4Q06945 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.97□□□□□ -1.45
SOX4Q06945 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.97□□□□□ -1.45
SOX4Q06945 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.97□□□□□ -1.45
SOX4Q06945 AC090751.1-201ENST00000566966 267 ntBASIC5.97□□□□□ -1.45
SOX4Q06945 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.97□□□□□ -1.45
SOX4Q06945 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC5.97□□□□□ -1.45
SOX4Q06945 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.97□□□□□ -1.45
SOX4Q06945 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.97□□□□□ -1.45
SOX4Q06945 SUMO2P15-201ENST00000604285 278 ntBASIC5.97□□□□□ -1.45
SOX4Q06945 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
SOX4Q06945 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC5.97□□□□□ -1.45
SOX4Q06945 RNF6P1-201ENST00000444889 1784 ntBASIC5.97□□□□□ -1.45
SOX4Q06945 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.97□□□□□ -1.45
SOX4Q06945 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
SOX4Q06945 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.97□□□□□ -1.45
SOX4Q06945 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.97□□□□□ -1.45
SOX4Q06945 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SOX4Q06945 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SOX4Q06945 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SOX4Q06945 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.97□□□□□ -1.45
SOX4Q06945 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.97□□□□□ -1.45
SOX4Q06945 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SOX4Q06945 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
SOX4Q06945 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.97□□□□□ -1.45
SOX4Q06945 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
SOX4Q06945 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.96□□□□□ -1.45
SOX4Q06945 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.96□□□□□ -1.45
SOX4Q06945 AC018809.2-201ENST00000602436 3823 ntBASIC5.96□□□□□ -1.45
SOX4Q06945 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.45
SOX4Q06945 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.45
SOX4Q06945 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
SOX4Q06945 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.96□□□□□ -1.46
SOX4Q06945 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.46
SOX4Q06945 AL034546.1-201ENST00000623740 3693 ntBASIC5.96□□□□□ -1.46
SOX4Q06945 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SOX4Q06945 RNA5SP183-201ENST00000362452 119 ntBASIC5.96□□□□□ -1.46
SOX4Q06945 RNA5SP335-201ENST00000363817 110 ntBASIC5.96□□□□□ -1.46
SOX4Q06945 RNU6-289P-201ENST00000364093 107 ntBASIC5.96□□□□□ -1.46
SOX4Q06945 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC5.96□□□□□ -1.46
SOX4Q06945 RNU6-74P-201ENST00000384235 107 ntBASIC5.96□□□□□ -1.46
SOX4Q06945 AC068050.1-201ENST00000394891 380 ntBASIC5.96□□□□□ -1.46
SOX4Q06945 RPS4XP8-201ENST00000402039 771 ntBASIC5.96□□□□□ -1.46
SOX4Q06945 TXNP7-201ENST00000406296 293 ntBASIC5.96□□□□□ -1.46
SOX4Q06945 MIR548P-201ENST00000408336 84 ntBASIC5.96□□□□□ -1.46
SOX4Q06945 RNU6-272P-201ENST00000411028 104 ntBASIC5.96□□□□□ -1.46
SOX4Q06945 Z93019.1-201ENST00000416450 973 ntBASIC5.96□□□□□ -1.46
SOX4Q06945 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC5.96□□□□□ -1.46
SOX4Q06945 AL606489.2-201ENST00000433886 234 ntBASIC5.96□□□□□ -1.46
SOX4Q06945 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC5.96□□□□□ -1.46
SOX4Q06945 MTND6P18-201ENST00000439477 513 ntBASIC5.96□□□□□ -1.46
SOX4Q06945 TRAPPC2P8-201ENST00000440676 396 ntBASIC5.96□□□□□ -1.46
SOX4Q06945 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.96□□□□□ -1.46
SOX4Q06945 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC5.96□□□□□ -1.46
SOX4Q06945 AC006480.1-201ENST00000449887 378 ntBASIC5.96□□□□□ -1.46
SOX4Q06945 FGF7P3-201ENST00000454645 303 ntBASIC5.96□□□□□ -1.46
SOX4Q06945 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SOX4Q06945 AC098583.1-201ENST00000480875 255 ntBASIC5.96□□□□□ -1.46
SOX4Q06945 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.46
SOX4Q06945 SRP72-202ENST00000504757 745 ntTSL 2 BASIC5.96□□□□□ -1.46
SOX4Q06945 AC024558.1-201ENST00000505008 528 ntBASIC5.96□□□□□ -1.46
SOX4Q06945 AC025674.1-201ENST00000507074 324 ntBASIC5.96□□□□□ -1.46
SOX4Q06945 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.96□□□□□ -1.46
SOX4Q06945 RNA5SP34-201ENST00000516887 130 ntBASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms