Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.25□□□□□ -1.89
H3F3AP84243 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC3.25□□□□□ -1.89
H3F3AP84243 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.25□□□□□ -1.89
H3F3AP84243 MTCO1P49-201ENST00000523429 802 ntBASIC3.25□□□□□ -1.89
H3F3AP84243 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.25□□□□□ -1.89
H3F3AP84243 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.25□□□□□ -1.89
H3F3AP84243 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.25□□□□□ -1.89
H3F3AP84243 MIR5047-201ENST00000579212 100 ntBASIC3.25□□□□□ -1.89
H3F3AP84243 NF1P5-201ENST00000588287 448 ntBASIC3.25□□□□□ -1.89
H3F3AP84243 AL020997.2-201ENST00000602607 184 ntBASIC3.25□□□□□ -1.89
H3F3AP84243 AC005972.3-201ENST00000606304 481 ntBASIC3.25□□□□□ -1.89
H3F3AP84243 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.25□□□□□ -1.89
H3F3AP84243 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.25□□□□□ -1.89
H3F3AP84243 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.25□□□□□ -1.89
H3F3AP84243 AC039056.2-201ENST00000622261 511 ntBASIC3.25□□□□□ -1.89
H3F3AP84243 MIR7153-201ENST00000637758 57 ntBASIC3.25□□□□□ -1.89
H3F3AP84243 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
H3F3AP84243 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
H3F3AP84243 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
H3F3AP84243 CEP170P1-201ENST00000502249 4587 ntBASIC3.25□□□□□ -1.89
H3F3AP84243 SAGE2P-201ENST00000420011 2126 ntBASIC3.25□□□□□ -1.89
H3F3AP84243 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
H3F3AP84243 RNA5SP124-201ENST00000362739 110 ntBASIC3.24□□□□□ -1.89
H3F3AP84243 RNU6-532P-201ENST00000384318 107 ntBASIC3.24□□□□□ -1.89
H3F3AP84243 SNORD3H-201ENST00000384486 214 ntBASIC3.24□□□□□ -1.89
H3F3AP84243 MIR134-201ENST00000385258 73 ntBASIC3.24□□□□□ -1.89
H3F3AP84243 RN7SKP285-201ENST00000410137 318 ntBASIC3.24□□□□□ -1.89
H3F3AP84243 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
H3F3AP84243 AL035423.1-201ENST00000420331 213 ntBASIC3.24□□□□□ -1.89
H3F3AP84243 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.24□□□□□ -1.89
H3F3AP84243 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.24□□□□□ -1.89
H3F3AP84243 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
H3F3AP84243 AC245517.2-201ENST00000442890 346 ntBASIC3.24□□□□□ -1.89
H3F3AP84243 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.24□□□□□ -1.89
H3F3AP84243 RPS3AP46-201ENST00000448352 682 ntBASIC3.24□□□□□ -1.89
H3F3AP84243 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.24□□□□□ -1.89
H3F3AP84243 RN7SL542P-201ENST00000467147 294 ntBASIC3.24□□□□□ -1.89
H3F3AP84243 RPL23AP12-201ENST00000467573 473 ntBASIC3.24□□□□□ -1.89
H3F3AP84243 AC092451.1-201ENST00000480211 153 ntBASIC3.24□□□□□ -1.89
H3F3AP84243 HMGN1P11-201ENST00000508668 303 ntBASIC3.24□□□□□ -1.89
H3F3AP84243 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.24□□□□□ -1.89
H3F3AP84243 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC3.24□□□□□ -1.89
H3F3AP84243 AP000926.4-201ENST00000527351 454 ntBASIC3.24□□□□□ -1.89
H3F3AP84243 PDCL2P2-201ENST00000533651 189 ntBASIC3.24□□□□□ -1.89
H3F3AP84243 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
H3F3AP84243 AC023161.2-201ENST00000551218 780 ntBASIC3.24□□□□□ -1.89
H3F3AP84243 TRAV15-201ENST00000556680 249 ntBASIC3.24□□□□□ -1.89
H3F3AP84243 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.24□□□□□ -1.89
H3F3AP84243 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.24□□□□□ -1.89
H3F3AP84243 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.24□□□□□ -1.89
H3F3AP84243 AC103710.3-201ENST00000608157 948 ntBASIC3.24□□□□□ -1.89
H3F3AP84243 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.24□□□□□ -1.89
H3F3AP84243 AC138649.5-201ENST00000637456 137 ntBASIC3.24□□□□□ -1.89
H3F3AP84243 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
H3F3AP84243 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
H3F3AP84243 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
H3F3AP84243 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
H3F3AP84243 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.24□□□□□ -1.89
H3F3AP84243 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
H3F3AP84243 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
H3F3AP84243 CR381670.1-201ENST00000624291 1693 ntBASIC3.24□□□□□ -1.89
H3F3AP84243 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
H3F3AP84243 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
H3F3AP84243 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
H3F3AP84243 AC025125.1-201ENST00000624743 1922 ntBASIC3.23□□□□□ -1.89
H3F3AP84243 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.23□□□□□ -1.89
H3F3AP84243 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
H3F3AP84243 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
H3F3AP84243 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
H3F3AP84243 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
H3F3AP84243 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
H3F3AP84243 RNA5SP42-201ENST00000364278 115 ntBASIC3.23□□□□□ -1.89
H3F3AP84243 MTCO3P31-201ENST00000405526 789 ntBASIC3.23□□□□□ -1.89
H3F3AP84243 PRELID3BP11-201ENST00000414230 479 ntBASIC3.23□□□□□ -1.89
H3F3AP84243 RPL17P36-201ENST00000420302 549 ntBASIC3.23□□□□□ -1.89
H3F3AP84243 AC006989.1-201ENST00000427212 131 ntBASIC3.23□□□□□ -1.89
H3F3AP84243 ELOCP6-201ENST00000429066 328 ntBASIC3.23□□□□□ -1.89
H3F3AP84243 AC018644.1-201ENST00000429934 551 ntBASIC3.23□□□□□ -1.89
H3F3AP84243 MTCO1P52-201ENST00000433928 531 ntBASIC3.23□□□□□ -1.89
H3F3AP84243 AL138799.3-201ENST00000438968 350 ntBASIC3.23□□□□□ -1.89
H3F3AP84243 AC122718.1-201ENST00000439448 744 ntBASIC3.23□□□□□ -1.89
H3F3AP84243 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.23□□□□□ -1.89
H3F3AP84243 AL133547.1-201ENST00000448546 220 ntBASIC3.23□□□□□ -1.89
H3F3AP84243 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.23□□□□□ -1.89
H3F3AP84243 CEACAMP4-201ENST00000457676 421 ntBASIC3.23□□□□□ -1.89
H3F3AP84243 ELOCP12-201ENST00000458706 328 ntBASIC3.23□□□□□ -1.89
H3F3AP84243 SNORD105B-201ENST00000458770 79 ntBASIC3.23□□□□□ -1.89
H3F3AP84243 RNU7-27P-201ENST00000459281 62 ntBASIC3.23□□□□□ -1.89
H3F3AP84243 RPL7P15-201ENST00000461190 712 ntBASIC3.23□□□□□ -1.89
H3F3AP84243 RPL23AP62-201ENST00000463396 453 ntBASIC3.23□□□□□ -1.89
H3F3AP84243 FAM133DP-201ENST00000464802 691 ntBASIC3.23□□□□□ -1.89
H3F3AP84243 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC3.23□□□□□ -1.89
H3F3AP84243 AP001086.1-201ENST00000494882 321 ntBASIC3.23□□□□□ -1.89
H3F3AP84243 OR5H4P-201ENST00000510851 923 ntBASIC3.23□□□□□ -1.89
H3F3AP84243 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC3.23□□□□□ -1.89
H3F3AP84243 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.23□□□□□ -1.89
H3F3AP84243 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
H3F3AP84243 AC099489.2-201ENST00000574976 260 ntBASIC3.23□□□□□ -1.89
H3F3AP84243 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.23□□□□□ -1.89
H3F3AP84243 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms