Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AC022916.3-201ENST00000592961 742 ntBASIC2.2□□□□□ -2.06
RPL39P62891 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC2.2□□□□□ -2.06
RPL39P62891 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC2.2□□□□□ -2.06
RPL39P62891 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.2□□□□□ -2.06
RPL39P62891 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.2□□□□□ -2.06
RPL39P62891 AC019080.5-201ENST00000624891 757 ntBASIC2.2□□□□□ -2.06
RPL39P62891 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC2.2□□□□□ -2.06
RPL39P62891 AL161431.1-201ENST00000618966 4205 ntBASIC2.2□□□□□ -2.06
RPL39P62891 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC2.2□□□□□ -2.06
RPL39P62891 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
RPL39P62891 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
RPL39P62891 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.2□□□□□ -2.06
RPL39P62891 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
RPL39P62891 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC2.19□□□□□ -2.06
RPL39P62891 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
RPL39P62891 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC2.19□□□□□ -2.06
RPL39P62891 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
RPL39P62891 GTF2H2B-203ENST00000508065 1432 ntBASIC2.19□□□□□ -2.06
RPL39P62891 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
RPL39P62891 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
RPL39P62891 XPOTP1-201ENST00000443317 2398 ntBASIC2.19□□□□□ -2.06
RPL39P62891 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
RPL39P62891 XIAPP3-201ENST00000312918 795 ntBASIC2.19□□□□□ -2.06
RPL39P62891 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
RPL39P62891 CGA-201ENST00000369582 729 ntTSL 5 BASIC2.19□□□□□ -2.06
RPL39P62891 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
RPL39P62891 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC2.19□□□□□ -2.06
RPL39P62891 AC110754.1-201ENST00000399740 601 ntBASIC2.19□□□□□ -2.06
RPL39P62891 RNA5SP239-201ENST00000410218 129 ntBASIC2.19□□□□□ -2.06
RPL39P62891 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
RPL39P62891 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC2.19□□□□□ -2.06
RPL39P62891 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC2.19□□□□□ -2.06
RPL39P62891 BX842559.1-201ENST00000419615 532 ntBASIC2.19□□□□□ -2.06
RPL39P62891 OR2B8P-201ENST00000432841 938 ntBASIC2.19□□□□□ -2.06
RPL39P62891 NOTCH2P1-201ENST00000443481 624 ntBASIC2.19□□□□□ -2.06
RPL39P62891 AC069540.1-201ENST00000446320 988 ntBASIC2.19□□□□□ -2.06
RPL39P62891 GAPDHP27-201ENST00000447427 1020 ntBASIC2.19□□□□□ -2.06
RPL39P62891 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
RPL39P62891 RPL26P28-201ENST00000451325 435 ntBASIC2.19□□□□□ -2.06
RPL39P62891 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC2.19□□□□□ -2.06
RPL39P62891 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC2.19□□□□□ -2.06
RPL39P62891 RPL21P41-201ENST00000459863 264 ntBASIC2.19□□□□□ -2.06
RPL39P62891 AC021678.1-201ENST00000505195 936 ntBASIC2.19□□□□□ -2.06
RPL39P62891 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC2.19□□□□□ -2.06
RPL39P62891 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
RPL39P62891 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC2.19□□□□□ -2.06
RPL39P62891 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC2.19□□□□□ -2.06
RPL39P62891 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC2.19□□□□□ -2.06
RPL39P62891 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC2.19□□□□□ -2.06
RPL39P62891 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC2.19□□□□□ -2.06
RPL39P62891 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
RPL39P62891 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC2.19□□□□□ -2.06
RPL39P62891 MIR2682-201ENST00000580305 110 ntBASIC2.19□□□□□ -2.06
RPL39P62891 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC2.19□□□□□ -2.06
RPL39P62891 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.19□□□□□ -2.06
RPL39P62891 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC2.19□□□□□ -2.06
RPL39P62891 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC2.19□□□□□ -2.06
RPL39P62891 AC012119.1-201ENST00000603184 222 ntBASIC2.19□□□□□ -2.06
RPL39P62891 AC099778.2-201ENST00000610904 211 ntBASIC2.19□□□□□ -2.06
RPL39P62891 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC2.19□□□□□ -2.06
RPL39P62891 AC084035.1-201ENST00000634543 607 ntBASIC2.19□□□□□ -2.06
RPL39P62891 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.19□□□□□ -2.06
RPL39P62891 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
RPL39P62891 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
RPL39P62891 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
RPL39P62891 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
RPL39P62891 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
RPL39P62891 AC107027.3-201ENST00000565095 3473 ntBASIC2.18□□□□□ -2.06
RPL39P62891 AL353743.4-201ENST00000422653 1547 ntBASIC2.18□□□□□ -2.06
RPL39P62891 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
RPL39P62891 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC2.18□□□□□ -2.06
RPL39P62891 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
RPL39P62891 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.18□□□□□ -2.06
RPL39P62891 RNA5SP274-201ENST00000410484 108 ntBASIC2.18□□□□□ -2.06
RPL39P62891 RN7SKP123-201ENST00000410732 291 ntBASIC2.18□□□□□ -2.06
RPL39P62891 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC2.18□□□□□ -2.06
RPL39P62891 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC2.18□□□□□ -2.06
RPL39P62891 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.18□□□□□ -2.06
RPL39P62891 AL390023.1-201ENST00000428836 262 ntBASIC2.18□□□□□ -2.06
RPL39P62891 RPL21P110-201ENST00000433345 446 ntBASIC2.18□□□□□ -2.06
RPL39P62891 AC108734.1-201ENST00000439549 399 ntBASIC2.18□□□□□ -2.06
RPL39P62891 RBMY2UP-201ENST00000453474 324 ntBASIC2.18□□□□□ -2.06
RPL39P62891 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC2.18□□□□□ -2.06
RPL39P62891 PRDX3P4-201ENST00000470828 747 ntBASIC2.18□□□□□ -2.06
RPL39P62891 AC011037.1-201ENST00000483964 558 ntBASIC2.18□□□□□ -2.06
RPL39P62891 RN7SL633P-201ENST00000488974 297 ntBASIC2.18□□□□□ -2.06
RPL39P62891 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC2.18□□□□□ -2.06
RPL39P62891 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC2.18□□□□□ -2.06
RPL39P62891 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC2.18□□□□□ -2.06
RPL39P62891 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC2.18□□□□□ -2.06
RPL39P62891 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC2.18□□□□□ -2.06
RPL39P62891 ARL6IP1P1-201ENST00000545836 610 ntBASIC2.18□□□□□ -2.06
RPL39P62891 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC2.18□□□□□ -2.06
RPL39P62891 AC007224.1-201ENST00000564410 144 ntBASIC2.18□□□□□ -2.06
RPL39P62891 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC2.18□□□□□ -2.06
RPL39P62891 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC2.18□□□□□ -2.06
RPL39P62891 ZNF415P1-201ENST00000582279 1166 ntBASIC2.18□□□□□ -2.06
RPL39P62891 AC083760.1-201ENST00000589621 670 ntBASIC2.18□□□□□ -2.06
RPL39P62891 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC2.18□□□□□ -2.06
RPL39P62891 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms