Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CDH12P55289 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC4.29□□□□□ -1.72
CDH12P55289 ZFRP1-201ENST00000457579 2970 ntBASIC4.29□□□□□ -1.72
CDH12P55289 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.29□□□□□ -1.72
CDH12P55289 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CDH12P55289 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.28□□□□□ -1.72
CDH12P55289 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CDH12P55289 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.28□□□□□ -1.72
CDH12P55289 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CDH12P55289 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.28□□□□□ -1.72
CDH12P55289 AC109780.1-201ENST00000451768 1344 ntBASIC4.28□□□□□ -1.72
CDH12P55289 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
CDH12P55289 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CDH12P55289 Y_RNA.51-201ENST00000362725 102 ntBASIC4.28□□□□□ -1.72
CDH12P55289 SNORA4.1-201ENST00000364263 144 ntBASIC4.28□□□□□ -1.72
CDH12P55289 RNU6-115P-201ENST00000364310 107 ntBASIC4.28□□□□□ -1.72
CDH12P55289 RN7SKP269-201ENST00000365545 319 ntBASIC4.28□□□□□ -1.72
CDH12P55289 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
CDH12P55289 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4.28□□□□□ -1.72
CDH12P55289 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.28□□□□□ -1.72
CDH12P55289 PIGPP2-201ENST00000411569 458 ntBASIC4.28□□□□□ -1.72
CDH12P55289 DPPA2P3-201ENST00000411853 655 ntBASIC4.28□□□□□ -1.72
CDH12P55289 TPT1P2-201ENST00000413105 503 ntBASIC4.28□□□□□ -1.72
CDH12P55289 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC4.28□□□□□ -1.72
CDH12P55289 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.28□□□□□ -1.72
CDH12P55289 PRELID3BP11-201ENST00000414230 479 ntBASIC4.28□□□□□ -1.72
CDH12P55289 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.28□□□□□ -1.72
CDH12P55289 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CDH12P55289 AC099336.2-201ENST00000422457 254 ntBASIC4.28□□□□□ -1.72
CDH12P55289 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC4.28□□□□□ -1.72
CDH12P55289 RPL21P91-201ENST00000429231 479 ntBASIC4.28□□□□□ -1.72
CDH12P55289 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CDH12P55289 RPL37P1-201ENST00000432310 284 ntBASIC4.28□□□□□ -1.72
CDH12P55289 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.28□□□□□ -1.72
CDH12P55289 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.28□□□□□ -1.72
CDH12P55289 NDUFA5P7-201ENST00000452914 242 ntBASIC4.28□□□□□ -1.72
CDH12P55289 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC4.28□□□□□ -1.72
CDH12P55289 AC099560.2-201ENST00000457554 255 ntBASIC4.28□□□□□ -1.72
CDH12P55289 AC006511.1-201ENST00000470614 315 ntBASIC4.28□□□□□ -1.72
CDH12P55289 RPL7AP6-201ENST00000477943 801 ntBASIC4.28□□□□□ -1.72
CDH12P55289 RPL7P38-201ENST00000488396 739 ntBASIC4.28□□□□□ -1.72
CDH12P55289 RN7SL808P-201ENST00000496066 299 ntBASIC4.28□□□□□ -1.72
CDH12P55289 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC4.28□□□□□ -1.72
CDH12P55289 LTV1P1-201ENST00000510683 1237 ntBASIC4.28□□□□□ -1.72
CDH12P55289 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.28□□□□□ -1.72
CDH12P55289 RPL7L1P13-201ENST00000511702 739 ntBASIC4.28□□□□□ -1.72
CDH12P55289 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.28□□□□□ -1.72
CDH12P55289 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.28□□□□□ -1.72
CDH12P55289 AC021006.3-201ENST00000530771 192 ntBASIC4.28□□□□□ -1.72
CDH12P55289 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.28□□□□□ -1.72
CDH12P55289 REXO2-218ENST00000544827 880 ntTSL 3 BASIC4.28□□□□□ -1.72
CDH12P55289 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.28□□□□□ -1.72
CDH12P55289 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC4.28□□□□□ -1.72
CDH12P55289 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC4.28□□□□□ -1.72
CDH12P55289 AC017100.2-201ENST00000584628 355 ntBASIC4.28□□□□□ -1.72
CDH12P55289 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.28□□□□□ -1.72
CDH12P55289 AP001981.2-201ENST00000603241 418 ntBASIC4.28□□□□□ -1.72
CDH12P55289 AP000811.1-201ENST00000603803 651 ntBASIC4.28□□□□□ -1.72
CDH12P55289 AC012557.2-201ENST00000605919 418 ntBASIC4.28□□□□□ -1.72
CDH12P55289 AL445222.1-201ENST00000607259 628 ntBASIC4.28□□□□□ -1.72
CDH12P55289 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CDH12P55289 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.28□□□□□ -1.72
CDH12P55289 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.28□□□□□ -1.72
CDH12P55289 USP9YP4-201ENST00000424401 1745 ntBASIC4.28□□□□□ -1.72
CDH12P55289 CR381670.1-201ENST00000624291 1693 ntBASIC4.28□□□□□ -1.72
CDH12P55289 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CDH12P55289 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CDH12P55289 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CDH12P55289 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CDH12P55289 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.27□□□□□ -1.73
CDH12P55289 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CDH12P55289 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CDH12P55289 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CDH12P55289 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
CDH12P55289 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CDH12P55289 Y_RNA.201-201ENST00000364052 96 ntBASIC4.27□□□□□ -1.73
CDH12P55289 RN7SKP224-201ENST00000364140 325 ntBASIC4.27□□□□□ -1.73
CDH12P55289 AC092642.1-201ENST00000392417 425 ntBASIC4.27□□□□□ -1.73
CDH12P55289 ATP5F1P4-201ENST00000397288 746 ntBASIC4.27□□□□□ -1.73
CDH12P55289 AL031577.2-201ENST00000404133 280 ntBASIC4.27□□□□□ -1.73
CDH12P55289 PRRC2CP1-201ENST00000404428 159 ntBASIC4.27□□□□□ -1.73
CDH12P55289 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.27□□□□□ -1.73
CDH12P55289 MOB4-205ENST00000409916 829 ntTSL 3 BASIC4.27□□□□□ -1.73
CDH12P55289 AL591848.1-201ENST00000413092 322 ntBASIC4.27□□□□□ -1.73
CDH12P55289 ZNF885P-201ENST00000420174 1098 ntBASIC4.27□□□□□ -1.73
CDH12P55289 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC4.27□□□□□ -1.73
CDH12P55289 RPP40P1-201ENST00000426762 456 ntBASIC4.27□□□□□ -1.73
CDH12P55289 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.27□□□□□ -1.73
CDH12P55289 AC010881.1-201ENST00000433830 235 ntBASIC4.27□□□□□ -1.73
CDH12P55289 AC098826.1-201ENST00000433943 471 ntBASIC4.27□□□□□ -1.73
CDH12P55289 MTCO2P16-201ENST00000436962 677 ntBASIC4.27□□□□□ -1.73
CDH12P55289 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC4.27□□□□□ -1.73
CDH12P55289 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC4.27□□□□□ -1.73
CDH12P55289 DDX39BP2-208ENST00000453923 258 ntBASIC4.27□□□□□ -1.73
CDH12P55289 SCARNA22-201ENST00000503991 125 ntBASIC4.27□□□□□ -1.73
CDH12P55289 MTND5P13-201ENST00000513046 1079 ntBASIC4.27□□□□□ -1.73
CDH12P55289 Y_RNA.655-201ENST00000515919 96 ntBASIC4.27□□□□□ -1.73
CDH12P55289 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.27□□□□□ -1.73
CDH12P55289 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.27□□□□□ -1.73
CDH12P55289 AC134698.5-201ENST00000519444 336 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms