Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
CDH11P55287 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.03□□□□□ -1.76
CDH11P55287 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC4.03□□□□□ -1.76
CDH11P55287 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CDH11P55287 SNORA74C-2-201ENST00000411179 201 ntBASIC4.03□□□□□ -1.76
CDH11P55287 AL160275.2-201ENST00000412010 394 ntBASIC4.03□□□□□ -1.76
CDH11P55287 RPS23P10-201ENST00000416185 486 ntBASIC4.03□□□□□ -1.76
CDH11P55287 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC4.03□□□□□ -1.76
CDH11P55287 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.03□□□□□ -1.76
CDH11P55287 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC4.03□□□□□ -1.76
CDH11P55287 AC005005.2-201ENST00000420779 380 ntBASIC4.03□□□□□ -1.76
CDH11P55287 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.03□□□□□ -1.76
CDH11P55287 RPL23AP1-201ENST00000428990 471 ntBASIC4.03□□□□□ -1.76
CDH11P55287 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC4.03□□□□□ -1.76
CDH11P55287 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.03□□□□□ -1.76
CDH11P55287 PRELID3BP10-201ENST00000431957 584 ntBASIC4.03□□□□□ -1.76
CDH11P55287 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.03□□□□□ -1.76
CDH11P55287 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.03□□□□□ -1.76
CDH11P55287 AL162388.1-201ENST00000450912 352 ntBASIC4.03□□□□□ -1.76
CDH11P55287 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC4.03□□□□□ -1.76
CDH11P55287 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC4.03□□□□□ -1.76
CDH11P55287 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.03□□□□□ -1.76
CDH11P55287 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.03□□□□□ -1.76
CDH11P55287 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.03□□□□□ -1.76
CDH11P55287 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC4.03□□□□□ -1.76
CDH11P55287 AC090695.1-201ENST00000561269 1222 ntBASIC4.03□□□□□ -1.76
CDH11P55287 MIR4277-201ENST00000578298 84 ntBASIC4.03□□□□□ -1.76
CDH11P55287 AC069061.3-201ENST00000582254 823 ntBASIC4.03□□□□□ -1.76
CDH11P55287 AC061975.8-201ENST00000587058 721 ntBASIC4.03□□□□□ -1.76
CDH11P55287 AC073091.2-201ENST00000603205 907 ntBASIC4.03□□□□□ -1.76
CDH11P55287 AL139286.1-201ENST00000604465 483 ntBASIC4.03□□□□□ -1.76
CDH11P55287 Z98200.1-201ENST00000607298 470 ntBASIC4.03□□□□□ -1.76
CDH11P55287 AC007349.4-201ENST00000608114 532 ntBASIC4.03□□□□□ -1.76
CDH11P55287 AL031666.3-201ENST00000609320 1006 ntBASIC4.03□□□□□ -1.76
CDH11P55287 AC116447.1-201ENST00000613153 453 ntBASIC4.03□□□□□ -1.76
CDH11P55287 AC123768.4-201ENST00000616244 701 ntBASIC4.03□□□□□ -1.76
CDH11P55287 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.03□□□□□ -1.76
CDH11P55287 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC4.03□□□□□ -1.76
CDH11P55287 MIR6758-201ENST00000620653 63 ntBASIC4.03□□□□□ -1.76
CDH11P55287 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CDH11P55287 AL049536.1-201ENST00000625043 744 ntBASIC4.03□□□□□ -1.76
CDH11P55287 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.03□□□□□ -1.76
CDH11P55287 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.03□□□□□ -1.76
CDH11P55287 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.03□□□□□ -1.76
CDH11P55287 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.03□□□□□ -1.76
CDH11P55287 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
CDH11P55287 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.03□□□□□ -1.76
CDH11P55287 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
CDH11P55287 AC011266.1-201ENST00000624119 3569 ntBASIC4.03□□□□□ -1.76
CDH11P55287 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.03□□□□□ -1.76
CDH11P55287 AC105074.1-201ENST00000623380 3095 ntBASIC4.03□□□□□ -1.76
CDH11P55287 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.02□□□□□ -1.77
CDH11P55287 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CDH11P55287 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
CDH11P55287 LINC00622-201ENST00000562811 1570 ntBASIC4.02□□□□□ -1.77
CDH11P55287 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.02□□□□□ -1.77
CDH11P55287 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.02□□□□□ -1.77
CDH11P55287 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CDH11P55287 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CDH11P55287 AP000756.2-201ENST00000624168 2567 ntBASIC4.02□□□□□ -1.77
CDH11P55287 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CDH11P55287 RNU6-1151P-201ENST00000384684 107 ntBASIC4.02□□□□□ -1.77
CDH11P55287 TAS2R15P-201ENST00000390674 928 ntBASIC4.02□□□□□ -1.77
CDH11P55287 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CDH11P55287 AF228730.1-201ENST00000397972 663 ntBASIC4.02□□□□□ -1.77
CDH11P55287 NCSTNP1-201ENST00000406229 144 ntBASIC4.02□□□□□ -1.77
CDH11P55287 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
CDH11P55287 RNU6-603P-201ENST00000411403 107 ntBASIC4.02□□□□□ -1.77
CDH11P55287 RPL6P29-201ENST00000414863 865 ntBASIC4.02□□□□□ -1.77
CDH11P55287 AC107081.1-201ENST00000414975 361 ntBASIC4.02□□□□□ -1.77
CDH11P55287 MTND2P16-201ENST00000419987 799 ntBASIC4.02□□□□□ -1.77
CDH11P55287 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.02□□□□□ -1.77
CDH11P55287 RPL7P44-201ENST00000424827 742 ntBASIC4.02□□□□□ -1.77
CDH11P55287 Z93242.1-201ENST00000427102 353 ntBASIC4.02□□□□□ -1.77
CDH11P55287 RAB11AP1-201ENST00000442978 646 ntBASIC4.02□□□□□ -1.77
CDH11P55287 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC4.02□□□□□ -1.77
CDH11P55287 PTENP1-201ENST00000447117 1215 ntBASIC4.02□□□□□ -1.77
CDH11P55287 HMGB1P16-201ENST00000447155 540 ntBASIC4.02□□□□□ -1.77
CDH11P55287 COX6CP18-201ENST00000448769 222 ntBASIC4.02□□□□□ -1.77
CDH11P55287 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.02□□□□□ -1.77
CDH11P55287 AC010469.1-201ENST00000463864 576 ntBASIC4.02□□□□□ -1.77
CDH11P55287 RN7SL385P-201ENST00000468873 276 ntBASIC4.02□□□□□ -1.77
CDH11P55287 AC011979.1-201ENST00000472300 483 ntBASIC4.02□□□□□ -1.77
CDH11P55287 AC013356.1-201ENST00000489027 564 ntBASIC4.02□□□□□ -1.77
CDH11P55287 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.02□□□□□ -1.77
CDH11P55287 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.02□□□□□ -1.77
CDH11P55287 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC4.02□□□□□ -1.77
CDH11P55287 AC007016.1-201ENST00000512110 244 ntBASIC4.02□□□□□ -1.77
CDH11P55287 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC4.02□□□□□ -1.77
CDH11P55287 MTATP6P15-201ENST00000527233 835 ntBASIC4.02□□□□□ -1.77
CDH11P55287 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC4.02□□□□□ -1.77
CDH11P55287 AP001781.1-201ENST00000530977 207 ntBASIC4.02□□□□□ -1.77
CDH11P55287 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC4.02□□□□□ -1.77
CDH11P55287 AL442163.2-201ENST00000553912 710 ntBASIC4.02□□□□□ -1.77
CDH11P55287 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.02□□□□□ -1.77
CDH11P55287 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.02□□□□□ -1.77
CDH11P55287 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.02□□□□□ -1.77
CDH11P55287 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.02□□□□□ -1.77
CDH11P55287 RPL23AP97-201ENST00000568955 471 ntBASIC4.02□□□□□ -1.77
CDH11P55287 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms