Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.84
CXCL12P48061 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.59□□□□□ -1.84
CXCL12P48061 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
CXCL12P48061 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CXCL12P48061 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.58□□□□□ -1.84
CXCL12P48061 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
CXCL12P48061 AC011155.1-201ENST00000316512 456 ntBASIC3.58□□□□□ -1.84
CXCL12P48061 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CXCL12P48061 BX323014.1-201ENST00000412876 237 ntBASIC3.58□□□□□ -1.84
CXCL12P48061 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3.58□□□□□ -1.84
CXCL12P48061 HMGB3P10-201ENST00000434734 572 ntBASIC3.58□□□□□ -1.84
CXCL12P48061 AC091862.1-201ENST00000438016 1100 ntBASIC3.58□□□□□ -1.84
CXCL12P48061 AC006028.1-201ENST00000438379 402 ntBASIC3.58□□□□□ -1.84
CXCL12P48061 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC3.58□□□□□ -1.84
CXCL12P48061 RPL37P3-201ENST00000456825 293 ntBASIC3.58□□□□□ -1.84
CXCL12P48061 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.58□□□□□ -1.84
CXCL12P48061 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CXCL12P48061 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CXCL12P48061 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
CXCL12P48061 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC3.58□□□□□ -1.84
CXCL12P48061 MIR4325-201ENST00000583049 90 ntBASIC3.58□□□□□ -1.84
CXCL12P48061 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.58□□□□□ -1.84
CXCL12P48061 AC078899.5-201ENST00000612475 178 ntBASIC3.58□□□□□ -1.84
CXCL12P48061 RMST_5.1-201ENST00000618704 126 ntBASIC3.58□□□□□ -1.84
CXCL12P48061 MIR7154-201ENST00000620673 73 ntBASIC3.58□□□□□ -1.84
CXCL12P48061 AP003355.3-201ENST00000623465 114 ntBASIC3.58□□□□□ -1.84
CXCL12P48061 AC024023.1-201ENST00000624530 922 ntBASIC3.58□□□□□ -1.84
CXCL12P48061 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.58□□□□□ -1.84
CXCL12P48061 OR11H5P-202ENST00000641612 1325 ntBASIC3.58□□□□□ -1.84
CXCL12P48061 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CXCL12P48061 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CXCL12P48061 AL353743.1-202ENST00000431724 1695 ntBASIC3.58□□□□□ -1.84
CXCL12P48061 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CXCL12P48061 Z73965.1-201ENST00000623412 2297 ntBASIC3.58□□□□□ -1.84
CXCL12P48061 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
CXCL12P48061 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CXCL12P48061 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
CXCL12P48061 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CXCL12P48061 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CXCL12P48061 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CXCL12P48061 IL6STP1-201ENST00000346911 1020 ntBASIC3.57□□□□□ -1.84
CXCL12P48061 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.57□□□□□ -1.84
CXCL12P48061 RNU6-1279P-201ENST00000383917 103 ntBASIC3.57□□□□□ -1.84
CXCL12P48061 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.57□□□□□ -1.84
CXCL12P48061 CCRL1P1-201ENST00000449542 1053 ntBASIC3.57□□□□□ -1.84
CXCL12P48061 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC3.57□□□□□ -1.84
CXCL12P48061 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC3.57□□□□□ -1.84
CXCL12P48061 AC093663.1-201ENST00000497190 394 ntBASIC3.57□□□□□ -1.84
CXCL12P48061 AC021146.3-201ENST00000511911 260 ntBASIC3.57□□□□□ -1.84
CXCL12P48061 AC018797.3-201ENST00000513388 1241 ntBASIC3.57□□□□□ -1.84
CXCL12P48061 HIGD1AP3-201ENST00000515857 278 ntBASIC3.57□□□□□ -1.84
CXCL12P48061 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC3.57□□□□□ -1.84
CXCL12P48061 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC3.57□□□□□ -1.84
CXCL12P48061 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CXCL12P48061 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.57□□□□□ -1.84
CXCL12P48061 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC3.57□□□□□ -1.84
CXCL12P48061 MTATP6P25-201ENST00000574491 261 ntBASIC3.57□□□□□ -1.84
CXCL12P48061 MIR5680-201ENST00000577577 84 ntBASIC3.57□□□□□ -1.84
CXCL12P48061 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.57□□□□□ -1.84
CXCL12P48061 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
CXCL12P48061 AL606834.2-201ENST00000602954 668 ntBASIC3.57□□□□□ -1.84
CXCL12P48061 AL137843.1-201ENST00000605078 385 ntBASIC3.57□□□□□ -1.84
CXCL12P48061 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.57□□□□□ -1.84
CXCL12P48061 AL732618.1-201ENST00000623251 301 ntBASIC3.57□□□□□ -1.84
CXCL12P48061 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.57□□□□□ -1.84
CXCL12P48061 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.57□□□□□ -1.84
CXCL12P48061 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
CXCL12P48061 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CXCL12P48061 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CXCL12P48061 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.56□□□□□ -1.84
CXCL12P48061 AL451142.2-201ENST00000429076 2090 ntBASIC3.56□□□□□ -1.84
CXCL12P48061 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CXCL12P48061 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
CXCL12P48061 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CXCL12P48061 AC134882.1-201ENST00000603738 1676 ntBASIC3.56□□□□□ -1.84
CXCL12P48061 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CXCL12P48061 AC024341.1-201ENST00000526444 1552 ntBASIC3.56□□□□□ -1.84
CXCL12P48061 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
CXCL12P48061 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
CXCL12P48061 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
CXCL12P48061 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC3.56□□□□□ -1.84
CXCL12P48061 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CXCL12P48061 HLFP1-201ENST00000402375 499 ntBASIC3.56□□□□□ -1.84
CXCL12P48061 HMGB3P20-201ENST00000417997 600 ntBASIC3.56□□□□□ -1.84
CXCL12P48061 RWDD4P2-201ENST00000426392 563 ntBASIC3.56□□□□□ -1.84
CXCL12P48061 DYNLL1P7-201ENST00000429273 258 ntBASIC3.56□□□□□ -1.84
CXCL12P48061 AC087650.1-201ENST00000431445 468 ntBASIC3.56□□□□□ -1.84
CXCL12P48061 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.56□□□□□ -1.84
CXCL12P48061 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC3.56□□□□□ -1.84
CXCL12P48061 AL671855.1-201ENST00000446875 1203 ntBASIC3.56□□□□□ -1.84
CXCL12P48061 AC243772.1-201ENST00000451620 410 ntBASIC3.56□□□□□ -1.84
CXCL12P48061 AC099563.1-201ENST00000456086 418 ntBASIC3.56□□□□□ -1.84
CXCL12P48061 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.56□□□□□ -1.84
CXCL12P48061 AC010469.1-201ENST00000463864 576 ntBASIC3.56□□□□□ -1.84
CXCL12P48061 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.56□□□□□ -1.84
CXCL12P48061 UBE2DNL-203ENST00000474922 222 ntBASIC3.56□□□□□ -1.84
CXCL12P48061 LARP7P4-201ENST00000481075 878 ntBASIC3.56□□□□□ -1.84
CXCL12P48061 RWDD4P1-201ENST00000488019 565 ntBASIC3.56□□□□□ -1.84
CXCL12P48061 PHBP14-201ENST00000512887 367 ntBASIC3.56□□□□□ -1.84
CXCL12P48061 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms