Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.89□□□□□ -1.63
CD40P25942 AL133482.1-201ENST00000415988 498 ntBASIC4.89□□□□□ -1.63
CD40P25942 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
CD40P25942 TIMM9P3-201ENST00000428659 274 ntBASIC4.89□□□□□ -1.63
CD40P25942 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC4.89□□□□□ -1.63
CD40P25942 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC4.89□□□□□ -1.63
CD40P25942 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.89□□□□□ -1.63
CD40P25942 RPS20P1-201ENST00000434853 354 ntBASIC4.89□□□□□ -1.63
CD40P25942 AC002486.1-201ENST00000435098 391 ntBASIC4.89□□□□□ -1.63
CD40P25942 AC012075.1-201ENST00000436549 580 ntBASIC4.89□□□□□ -1.63
CD40P25942 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.89□□□□□ -1.63
CD40P25942 AL390119.1-201ENST00000440329 312 ntBASIC4.89□□□□□ -1.63
CD40P25942 RPS4XP4-201ENST00000443195 763 ntBASIC4.89□□□□□ -1.63
CD40P25942 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC4.89□□□□□ -1.63
CD40P25942 VN1R34P-201ENST00000447387 883 ntBASIC4.89□□□□□ -1.63
CD40P25942 AL450023.1-201ENST00000450868 751 ntBASIC4.89□□□□□ -1.63
CD40P25942 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC4.89□□□□□ -1.63
CD40P25942 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.89□□□□□ -1.63
CD40P25942 RPL7P39-201ENST00000481157 744 ntBASIC4.89□□□□□ -1.63
CD40P25942 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.89□□□□□ -1.63
CD40P25942 AC007182.2-201ENST00000489251 402 ntBASIC4.89□□□□□ -1.63
CD40P25942 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.89□□□□□ -1.63
CD40P25942 AC114967.1-201ENST00000504890 259 ntBASIC4.89□□□□□ -1.63
CD40P25942 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.89□□□□□ -1.63
CD40P25942 ARL4AP2-201ENST00000507378 601 ntBASIC4.89□□□□□ -1.63
CD40P25942 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC4.89□□□□□ -1.63
CD40P25942 AC105914.1-201ENST00000511798 226 ntBASIC4.89□□□□□ -1.63
CD40P25942 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC4.89□□□□□ -1.63
CD40P25942 IGHVIII-67-4-201ENST00000524281 296 ntBASIC4.89□□□□□ -1.63
CD40P25942 AK6P1-201ENST00000540219 478 ntBASIC4.89□□□□□ -1.63
CD40P25942 AC068993.1-201ENST00000546724 589 ntBASIC4.89□□□□□ -1.63
CD40P25942 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.89□□□□□ -1.63
CD40P25942 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.89□□□□□ -1.63
CD40P25942 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC4.89□□□□□ -1.63
CD40P25942 HMGB1P33-201ENST00000563485 527 ntBASIC4.89□□□□□ -1.63
CD40P25942 CASC22-201ENST00000569713 386 ntTSL 5 BASIC4.89□□□□□ -1.63
CD40P25942 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.89□□□□□ -1.63
CD40P25942 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.89□□□□□ -1.63
CD40P25942 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.89□□□□□ -1.63
CD40P25942 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.89□□□□□ -1.63
CD40P25942 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC4.89□□□□□ -1.63
CD40P25942 BNIP3P30-201ENST00000601184 574 ntBASIC4.89□□□□□ -1.63
CD40P25942 GMFG-212ENST00000602185 423 ntTSL 3 BASIC4.89□□□□□ -1.63
CD40P25942 AL133481.2-203ENST00000607558 139 ntBASIC4.89□□□□□ -1.63
CD40P25942 AC104458.1-201ENST00000608243 463 ntBASIC4.89□□□□□ -1.63
CD40P25942 BX664608.1-201ENST00000610519 487 ntBASIC4.89□□□□□ -1.63
CD40P25942 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.89□□□□□ -1.63
CD40P25942 AC009704.2-201ENST00000618739 483 ntBASIC4.89□□□□□ -1.63
CD40P25942 AL596245.1-201ENST00000618994 362 ntBASIC4.89□□□□□ -1.63
CD40P25942 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
CD40P25942 CGA-206ENST00000630630 832 ntTSL 2 BASIC4.89□□□□□ -1.63
CD40P25942 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.89□□□□□ -1.63
CD40P25942 ATP5A1P4-201ENST00000556888 1605 ntBASIC4.89□□□□□ -1.63
CD40P25942 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CD40P25942 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CD40P25942 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
CD40P25942 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
CD40P25942 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
CD40P25942 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CD40P25942 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CD40P25942 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.88□□□□□ -1.63
CD40P25942 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC4.88□□□□□ -1.63
CD40P25942 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CD40P25942 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CD40P25942 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC4.88□□□□□ -1.63
CD40P25942 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC4.88□□□□□ -1.63
CD40P25942 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CD40P25942 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
CD40P25942 SMG1P6-201ENST00000532337 2930 ntBASIC4.88□□□□□ -1.63
CD40P25942 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.88□□□□□ -1.63
CD40P25942 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CD40P25942 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CD40P25942 AL022311.1-201ENST00000623726 19416 ntBASIC4.88□□□□□ -1.63
CD40P25942 AC008033.1-201ENST00000216407 1162 ntBASIC4.88□□□□□ -1.63
CD40P25942 RNA5SP91-201ENST00000390902 119 ntBASIC4.88□□□□□ -1.63
CD40P25942 RPL23AP32-201ENST00000395315 459 ntBASIC4.88□□□□□ -1.63
CD40P25942 RNU2-15P-201ENST00000410692 191 ntBASIC4.88□□□□□ -1.63
CD40P25942 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC4.88□□□□□ -1.63
CD40P25942 USP9YP6-201ENST00000413550 854 ntBASIC4.88□□□□□ -1.63
CD40P25942 AC069213.2-201ENST00000420238 366 ntBASIC4.88□□□□□ -1.63
CD40P25942 AC019097.1-201ENST00000424783 735 ntBASIC4.88□□□□□ -1.63
CD40P25942 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC4.88□□□□□ -1.63
CD40P25942 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC4.88□□□□□ -1.63
CD40P25942 AC133104.1-201ENST00000429100 218 ntBASIC4.88□□□□□ -1.63
CD40P25942 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC4.88□□□□□ -1.63
CD40P25942 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.88□□□□□ -1.63
CD40P25942 NPM1P18-201ENST00000434232 732 ntBASIC4.88□□□□□ -1.63
CD40P25942 AC006335.2-201ENST00000437993 330 ntBASIC4.88□□□□□ -1.63
CD40P25942 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CD40P25942 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.88□□□□□ -1.63
CD40P25942 SPRYD7P1-201ENST00000443861 570 ntBASIC4.88□□□□□ -1.63
CD40P25942 IGHV5-78-201ENST00000450948 295 ntBASIC4.88□□□□□ -1.63
CD40P25942 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CD40P25942 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.88□□□□□ -1.63
CD40P25942 SIAH1P1-201ENST00000479411 923 ntBASIC4.88□□□□□ -1.63
CD40P25942 RN7SL214P-201ENST00000487317 265 ntBASIC4.88□□□□□ -1.63
CD40P25942 RN7SL184P-201ENST00000488308 297 ntBASIC4.88□□□□□ -1.63
CD40P25942 AC108693.1-201ENST00000496068 432 ntBASIC4.88□□□□□ -1.63
CD40P25942 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.88□□□□□ -1.63
CD40P25942 NPM1P41-201ENST00000512920 831 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms