Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 OR6K4P-201ENST00000423179 955 ntBASIC3.41□□□□□ -1.86
HMGA1P17096 HSFY1P1-201ENST00000423928 1178 ntBASIC3.41□□□□□ -1.86
HMGA1P17096 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.41□□□□□ -1.86
HMGA1P17096 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.41□□□□□ -1.86
HMGA1P17096 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC3.41□□□□□ -1.86
HMGA1P17096 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.41□□□□□ -1.86
HMGA1P17096 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HMGA1P17096 RPL12P26-201ENST00000452430 487 ntBASIC3.41□□□□□ -1.86
HMGA1P17096 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.41□□□□□ -1.86
HMGA1P17096 AC006445.1-201ENST00000491925 405 ntBASIC3.41□□□□□ -1.86
HMGA1P17096 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.41□□□□□ -1.86
HMGA1P17096 AC107934.2-201ENST00000518653 310 ntBASIC3.41□□□□□ -1.86
HMGA1P17096 KCTD9P6-201ENST00000522306 950 ntBASIC3.41□□□□□ -1.86
HMGA1P17096 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.41□□□□□ -1.86
HMGA1P17096 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC3.41□□□□□ -1.86
HMGA1P17096 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.41□□□□□ -1.86
HMGA1P17096 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HMGA1P17096 AC084036.1-201ENST00000609190 508 ntBASIC3.41□□□□□ -1.86
HMGA1P17096 uc_338.1-201ENST00000612113 180 ntBASIC3.41□□□□□ -1.86
HMGA1P17096 RNVU1-4-201ENST00000612985 164 ntBASIC3.41□□□□□ -1.86
HMGA1P17096 SNORD39.4-201ENST00000620099 78 ntBASIC3.41□□□□□ -1.86
HMGA1P17096 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.41□□□□□ -1.86
HMGA1P17096 AC110801.1-201ENST00000623590 212 ntBASIC3.41□□□□□ -1.86
HMGA1P17096 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC3.41□□□□□ -1.86
HMGA1P17096 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
HMGA1P17096 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HMGA1P17096 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.41□□□□□ -1.86
HMGA1P17096 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
HMGA1P17096 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC3.4□□□□□ -1.86
HMGA1P17096 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.4□□□□□ -1.87
HMGA1P17096 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.4□□□□□ -1.87
HMGA1P17096 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
HMGA1P17096 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
HMGA1P17096 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
HMGA1P17096 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
HMGA1P17096 AC096664.2-201ENST00000411843 406 ntBASIC3.4□□□□□ -1.87
HMGA1P17096 AL356968.1-201ENST00000416622 474 ntBASIC3.4□□□□□ -1.87
HMGA1P17096 AC012065.2-201ENST00000421295 375 ntBASIC3.4□□□□□ -1.87
HMGA1P17096 AL353678.1-201ENST00000422735 741 ntBASIC3.4□□□□□ -1.87
HMGA1P17096 RPL23AP82-202ENST00000427528 469 ntBASIC3.4□□□□□ -1.87
HMGA1P17096 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.4□□□□□ -1.87
HMGA1P17096 AC133473.1-201ENST00000455173 299 ntBASIC3.4□□□□□ -1.87
HMGA1P17096 AP001992.1-205ENST00000462248 379 ntBASIC3.4□□□□□ -1.87
HMGA1P17096 CENPBD1P1-201ENST00000464061 469 ntBASIC3.4□□□□□ -1.87
HMGA1P17096 S100A11P2-201ENST00000467589 312 ntBASIC3.4□□□□□ -1.87
HMGA1P17096 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC3.4□□□□□ -1.87
HMGA1P17096 RPS26P24-201ENST00000497656 331 ntBASIC3.4□□□□□ -1.87
HMGA1P17096 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.4□□□□□ -1.87
HMGA1P17096 GMPSP1-201ENST00000514075 579 ntBASIC3.4□□□□□ -1.87
HMGA1P17096 MIR2276-201ENST00000516886 89 ntBASIC3.4□□□□□ -1.87
HMGA1P17096 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC3.4□□□□□ -1.87
HMGA1P17096 VN1R92P-201ENST00000598511 928 ntBASIC3.4□□□□□ -1.87
HMGA1P17096 BNIP3P19-201ENST00000605397 577 ntBASIC3.4□□□□□ -1.87
HMGA1P17096 AL513477.2-201ENST00000607858 568 ntBASIC3.4□□□□□ -1.87
HMGA1P17096 AL157817.1-201ENST00000614264 790 ntBASIC3.4□□□□□ -1.87
HMGA1P17096 LINC00901.1-201ENST00000617252 152 ntBASIC3.4□□□□□ -1.87
HMGA1P17096 AC018816.2-201ENST00000621460 353 ntBASIC3.4□□□□□ -1.87
HMGA1P17096 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.4□□□□□ -1.87
HMGA1P17096 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC3.4□□□□□ -1.87
HMGA1P17096 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.4□□□□□ -1.87
HMGA1P17096 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
HMGA1P17096 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.39□□□□□ -1.87
HMGA1P17096 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HMGA1P17096 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.39□□□□□ -1.87
HMGA1P17096 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.39□□□□□ -1.87
HMGA1P17096 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.39□□□□□ -1.87
HMGA1P17096 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
HMGA1P17096 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.39□□□□□ -1.87
HMGA1P17096 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.39□□□□□ -1.87
HMGA1P17096 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.39□□□□□ -1.87
HMGA1P17096 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.39□□□□□ -1.87
HMGA1P17096 RPL7L1P1-201ENST00000448259 785 ntBASIC3.39□□□□□ -1.87
HMGA1P17096 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC3.39□□□□□ -1.87
HMGA1P17096 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.39□□□□□ -1.87
HMGA1P17096 RN7SL863P-201ENST00000462370 296 ntBASIC3.39□□□□□ -1.87
HMGA1P17096 AC021205.2-201ENST00000480069 347 ntBASIC3.39□□□□□ -1.87
HMGA1P17096 AC020893.1-201ENST00000502452 580 ntBASIC3.39□□□□□ -1.87
HMGA1P17096 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.39□□□□□ -1.87
HMGA1P17096 PTGES3P3-201ENST00000511479 482 ntBASIC3.39□□□□□ -1.87
HMGA1P17096 MIR2114-201ENST00000516645 80 ntBASIC3.39□□□□□ -1.87
HMGA1P17096 AC004024.1-201ENST00000549244 247 ntBASIC3.39□□□□□ -1.87
HMGA1P17096 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.39□□□□□ -1.87
HMGA1P17096 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC3.39□□□□□ -1.87
HMGA1P17096 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.39□□□□□ -1.87
HMGA1P17096 AC018692.3-201ENST00000623929 123 ntBASIC3.39□□□□□ -1.87
HMGA1P17096 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
HMGA1P17096 AL353743.1-202ENST00000431724 1695 ntBASIC3.39□□□□□ -1.87
HMGA1P17096 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HMGA1P17096 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.38□□□□□ -1.87
HMGA1P17096 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
HMGA1P17096 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
HMGA1P17096 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
HMGA1P17096 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.38□□□□□ -1.87
HMGA1P17096 AL138878.1-201ENST00000405131 347 ntBASIC3.38□□□□□ -1.87
HMGA1P17096 AL024507.1-201ENST00000412741 274 ntBASIC3.38□□□□□ -1.87
HMGA1P17096 AC007899.1-201ENST00000412776 775 ntBASIC3.38□□□□□ -1.87
HMGA1P17096 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HMGA1P17096 AL513174.1-201ENST00000423182 629 ntBASIC3.38□□□□□ -1.87
HMGA1P17096 RPL7P44-201ENST00000424827 742 ntBASIC3.38□□□□□ -1.87
HMGA1P17096 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms