Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 ATP5F1P1-201ENST00000433775 569 ntBASIC4.44□□□□□ -1.7
PCNAP12004 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.44□□□□□ -1.7
PCNAP12004 USP9YP22-201ENST00000438971 294 ntBASIC4.44□□□□□ -1.7
PCNAP12004 AC092393.1-201ENST00000439625 742 ntBASIC4.44□□□□□ -1.7
PCNAP12004 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.44□□□□□ -1.7
PCNAP12004 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC4.44□□□□□ -1.7
PCNAP12004 MTATP6P26-201ENST00000445926 662 ntBASIC4.44□□□□□ -1.7
PCNAP12004 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.44□□□□□ -1.7
PCNAP12004 AC239809.1-201ENST00000450470 217 ntBASIC4.44□□□□□ -1.7
PCNAP12004 RN7SL826P-201ENST00000479724 288 ntBASIC4.44□□□□□ -1.7
PCNAP12004 AC126121.1-201ENST00000482313 553 ntBASIC4.44□□□□□ -1.7
PCNAP12004 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.44□□□□□ -1.7
PCNAP12004 RPL36AP41-201ENST00000493820 306 ntBASIC4.44□□□□□ -1.7
PCNAP12004 AC116353.3-201ENST00000511215 249 ntBASIC4.44□□□□□ -1.7
PCNAP12004 C1GALT1P3-201ENST00000522049 819 ntBASIC4.44□□□□□ -1.7
PCNAP12004 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC4.44□□□□□ -1.7
PCNAP12004 AP001207.1-201ENST00000524051 481 ntBASIC4.44□□□□□ -1.7
PCNAP12004 CYCSP28-201ENST00000534284 321 ntBASIC4.44□□□□□ -1.7
PCNAP12004 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.44□□□□□ -1.7
PCNAP12004 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC4.44□□□□□ -1.7
PCNAP12004 NBEAP1-201ENST00000554452 979 ntBASIC4.44□□□□□ -1.7
PCNAP12004 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC4.44□□□□□ -1.7
PCNAP12004 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC4.44□□□□□ -1.7
PCNAP12004 AC209154.1-201ENST00000582156 337 ntBASIC4.44□□□□□ -1.7
PCNAP12004 MIR4737-201ENST00000583979 81 ntBASIC4.44□□□□□ -1.7
PCNAP12004 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.44□□□□□ -1.7
PCNAP12004 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.44□□□□□ -1.7
PCNAP12004 DUXAP3-201ENST00000603616 594 ntBASIC4.44□□□□□ -1.7
PCNAP12004 AC010680.3-201ENST00000604215 520 ntBASIC4.44□□□□□ -1.7
PCNAP12004 AC008966.2-201ENST00000606157 453 ntBASIC4.44□□□□□ -1.7
PCNAP12004 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.44□□□□□ -1.7
PCNAP12004 AC091979.2-201ENST00000607514 214 ntBASIC4.44□□□□□ -1.7
PCNAP12004 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PCNAP12004 AC100847.1-201ENST00000611316 481 ntBASIC4.44□□□□□ -1.7
PCNAP12004 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC4.44□□□□□ -1.7
PCNAP12004 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PCNAP12004 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PCNAP12004 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC4.44□□□□□ -1.7
PCNAP12004 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PCNAP12004 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PCNAP12004 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.44□□□□□ -1.7
PCNAP12004 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PCNAP12004 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PCNAP12004 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
PCNAP12004 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.43□□□□□ -1.7
PCNAP12004 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.43□□□□□ -1.7
PCNAP12004 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
PCNAP12004 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PCNAP12004 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PCNAP12004 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PCNAP12004 RNA5SP391-201ENST00000363456 119 ntBASIC4.43□□□□□ -1.7
PCNAP12004 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
PCNAP12004 RNU6-1300P-201ENST00000391046 108 ntBASIC4.43□□□□□ -1.7
PCNAP12004 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
PCNAP12004 TANK-203ENST00000402568 878 ntTSL 5 BASIC4.43□□□□□ -1.7
PCNAP12004 RPL23AP47-201ENST00000408017 460 ntBASIC4.43□□□□□ -1.7
PCNAP12004 AC107081.1-201ENST00000414975 361 ntBASIC4.43□□□□□ -1.7
PCNAP12004 BOLA3P4-201ENST00000418151 400 ntBASIC4.43□□□□□ -1.7
PCNAP12004 RPL7P53-201ENST00000421245 739 ntBASIC4.43□□□□□ -1.7
PCNAP12004 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC4.43□□□□□ -1.7
PCNAP12004 AC010881.1-201ENST00000433830 235 ntBASIC4.43□□□□□ -1.7
PCNAP12004 EEF1A1P1-201ENST00000447052 739 ntBASIC4.43□□□□□ -1.7
PCNAP12004 MTCYBP11-201ENST00000447254 1109 ntBASIC4.43□□□□□ -1.7
PCNAP12004 AC108463.1-201ENST00000450258 347 ntBASIC4.43□□□□□ -1.7
PCNAP12004 RPL21P134-201ENST00000453468 483 ntBASIC4.43□□□□□ -1.7
PCNAP12004 RFC5P1-201ENST00000454419 874 ntBASIC4.43□□□□□ -1.7
PCNAP12004 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.43□□□□□ -1.7
PCNAP12004 RN7SL610P-201ENST00000463845 291 ntBASIC4.43□□□□□ -1.7
PCNAP12004 MTND2P14-201ENST00000482139 351 ntBASIC4.43□□□□□ -1.7
PCNAP12004 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.43□□□□□ -1.7
PCNAP12004 RPL30P11-201ENST00000495304 339 ntBASIC4.43□□□□□ -1.7
PCNAP12004 AC025445.1-201ENST00000502728 300 ntBASIC4.43□□□□□ -1.7
PCNAP12004 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC4.43□□□□□ -1.7
PCNAP12004 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.43□□□□□ -1.7
PCNAP12004 OR5H4P-201ENST00000510851 923 ntBASIC4.43□□□□□ -1.7
PCNAP12004 KRT19P6-201ENST00000510983 209 ntBASIC4.43□□□□□ -1.7
PCNAP12004 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.43□□□□□ -1.7
PCNAP12004 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.43□□□□□ -1.7
PCNAP12004 OR5M2P-201ENST00000529003 936 ntBASIC4.43□□□□□ -1.7
PCNAP12004 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.43□□□□□ -1.7
PCNAP12004 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.43□□□□□ -1.7
PCNAP12004 HIGD1AP17-201ENST00000554576 276 ntBASIC4.43□□□□□ -1.7
PCNAP12004 AC051619.2-201ENST00000559063 397 ntBASIC4.43□□□□□ -1.7
PCNAP12004 GTF2IP8-201ENST00000560687 584 ntBASIC4.43□□□□□ -1.7
PCNAP12004 AL132657.2-201ENST00000564417 358 ntBASIC4.43□□□□□ -1.7
PCNAP12004 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC4.43□□□□□ -1.7
PCNAP12004 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.43□□□□□ -1.7
PCNAP12004 AC091178.1-203ENST00000584586 279 ntBASIC4.43□□□□□ -1.7
PCNAP12004 AL158042.1-201ENST00000605338 460 ntBASIC4.43□□□□□ -1.7
PCNAP12004 AL451074.6-201ENST00000608512 729 ntBASIC4.43□□□□□ -1.7
PCNAP12004 AC131235.4-201ENST00000609288 620 ntBASIC4.43□□□□□ -1.7
PCNAP12004 AC097478.2-201ENST00000610572 514 ntBASIC4.43□□□□□ -1.7
PCNAP12004 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC4.43□□□□□ -1.7
PCNAP12004 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PCNAP12004 AC079416.3-201ENST00000624479 549 ntBASIC4.43□□□□□ -1.7
PCNAP12004 MIR1322-201ENST00000638013 71 ntBASIC4.43□□□□□ -1.7
PCNAP12004 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
PCNAP12004 AC104454.1-201ENST00000421341 1401 ntBASIC4.43□□□□□ -1.7
PCNAP12004 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PCNAP12004 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms