Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.3□□□□□ -1.56
HLA-DOAP06340 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
HLA-DOAP06340 UBE2NP1-201ENST00000545592 458 ntBASIC5.3□□□□□ -1.56
HLA-DOAP06340 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC5.3□□□□□ -1.56
HLA-DOAP06340 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC5.3□□□□□ -1.56
HLA-DOAP06340 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC5.3□□□□□ -1.56
HLA-DOAP06340 ISCA1P3-201ENST00000577104 373 ntBASIC5.3□□□□□ -1.56
HLA-DOAP06340 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.3□□□□□ -1.56
HLA-DOAP06340 AC011477.5-201ENST00000586571 259 ntBASIC5.3□□□□□ -1.56
HLA-DOAP06340 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.3□□□□□ -1.56
HLA-DOAP06340 AL135786.2-201ENST00000608422 615 ntBASIC5.3□□□□□ -1.56
HLA-DOAP06340 AL391497.1-201ENST00000608671 547 ntBASIC5.3□□□□□ -1.56
HLA-DOAP06340 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC5.3□□□□□ -1.56
HLA-DOAP06340 AC011472.4-201ENST00000615848 491 ntBASIC5.3□□□□□ -1.56
HLA-DOAP06340 STMN1P1-201ENST00000617809 440 ntBASIC5.3□□□□□ -1.56
HLA-DOAP06340 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HLA-DOAP06340 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HLA-DOAP06340 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HLA-DOAP06340 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
HLA-DOAP06340 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
HLA-DOAP06340 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.29□□□□□ -1.56
HLA-DOAP06340 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HLA-DOAP06340 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
HLA-DOAP06340 RNU6-1215P-201ENST00000384441 102 ntBASIC5.29□□□□□ -1.56
HLA-DOAP06340 Y_RNA.517-201ENST00000384551 106 ntBASIC5.29□□□□□ -1.56
HLA-DOAP06340 AP000357.1-201ENST00000409926 1165 ntBASIC5.29□□□□□ -1.56
HLA-DOAP06340 RNU6-575P-201ENST00000411326 105 ntBASIC5.29□□□□□ -1.56
HLA-DOAP06340 CEACAMP8-201ENST00000413902 580 ntBASIC5.29□□□□□ -1.56
HLA-DOAP06340 MTCO2P34-201ENST00000421994 607 ntBASIC5.29□□□□□ -1.56
HLA-DOAP06340 AC004975.1-201ENST00000428733 208 ntBASIC5.29□□□□□ -1.56
HLA-DOAP06340 C8orf59P1-201ENST00000429930 303 ntBASIC5.29□□□□□ -1.56
HLA-DOAP06340 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.29□□□□□ -1.56
HLA-DOAP06340 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC5.29□□□□□ -1.56
HLA-DOAP06340 DNAJC19P8-201ENST00000452887 259 ntBASIC5.29□□□□□ -1.56
HLA-DOAP06340 AL672167.3-201ENST00000465951 960 ntBASIC5.29□□□□□ -1.56
HLA-DOAP06340 AC090602.1-201ENST00000469695 252 ntBASIC5.29□□□□□ -1.56
HLA-DOAP06340 AC069304.1-201ENST00000491593 704 ntBASIC5.29□□□□□ -1.56
HLA-DOAP06340 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC5.29□□□□□ -1.56
HLA-DOAP06340 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC5.29□□□□□ -1.56
HLA-DOAP06340 AC104108.1-201ENST00000509930 412 ntBASIC5.29□□□□□ -1.56
HLA-DOAP06340 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC5.29□□□□□ -1.56
HLA-DOAP06340 RNU6-720P-201ENST00000516363 108 ntBASIC5.29□□□□□ -1.56
HLA-DOAP06340 NPM1P6-201ENST00000521088 871 ntBASIC5.29□□□□□ -1.56
HLA-DOAP06340 NAP1L1P1-201ENST00000524793 1063 ntBASIC5.29□□□□□ -1.56
HLA-DOAP06340 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HLA-DOAP06340 AL139174.1-201ENST00000531489 886 ntBASIC5.29□□□□□ -1.56
HLA-DOAP06340 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
HLA-DOAP06340 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC5.29□□□□□ -1.56
HLA-DOAP06340 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.29□□□□□ -1.56
HLA-DOAP06340 NIFKP8-201ENST00000560500 874 ntBASIC5.29□□□□□ -1.56
HLA-DOAP06340 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC5.29□□□□□ -1.56
HLA-DOAP06340 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC5.29□□□□□ -1.56
HLA-DOAP06340 ROCK1P1-201ENST00000573767 549 ntBASIC5.29□□□□□ -1.56
HLA-DOAP06340 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC5.29□□□□□ -1.56
HLA-DOAP06340 MIR548Y-201ENST00000582739 110 ntBASIC5.29□□□□□ -1.56
HLA-DOAP06340 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC5.29□□□□□ -1.56
HLA-DOAP06340 AC113403.1-201ENST00000604910 193 ntBASIC5.29□□□□□ -1.56
HLA-DOAP06340 AC090525.3-201ENST00000605601 189 ntBASIC5.29□□□□□ -1.56
HLA-DOAP06340 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC5.29□□□□□ -1.56
HLA-DOAP06340 AC068944.2-201ENST00000610373 403 ntBASIC5.29□□□□□ -1.56
HLA-DOAP06340 AC023043.4-201ENST00000612081 449 ntBASIC5.29□□□□□ -1.56
HLA-DOAP06340 uc_338.13-201ENST00000618243 179 ntBASIC5.29□□□□□ -1.56
HLA-DOAP06340 AC092192.1-201ENST00000633154 1018 ntBASIC5.29□□□□□ -1.56
HLA-DOAP06340 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC5.29□□□□□ -1.56
HLA-DOAP06340 OR51H2P-202ENST00000641424 3046 ntBASIC5.29□□□□□ -1.56
HLA-DOAP06340 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HLA-DOAP06340 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
HLA-DOAP06340 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.29□□□□□ -1.56
HLA-DOAP06340 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
HLA-DOAP06340 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
HLA-DOAP06340 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HLA-DOAP06340 AC139769.1-204ENST00000472297 1931 ntBASIC5.29□□□□□ -1.56
HLA-DOAP06340 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC5.28□□□□□ -1.56
HLA-DOAP06340 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC5.28□□□□□ -1.56
HLA-DOAP06340 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HLA-DOAP06340 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HLA-DOAP06340 STX3-208ENST00000641815 3236 ntBASIC5.28□□□□□ -1.56
HLA-DOAP06340 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
HLA-DOAP06340 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HLA-DOAP06340 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC5.28□□□□□ -1.56
HLA-DOAP06340 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HLA-DOAP06340 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HLA-DOAP06340 AC008033.1-201ENST00000216407 1162 ntBASIC5.28□□□□□ -1.56
HLA-DOAP06340 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.28□□□□□ -1.56
HLA-DOAP06340 Y_RNA.359-201ENST00000365498 102 ntBASIC5.28□□□□□ -1.56
HLA-DOAP06340 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
HLA-DOAP06340 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
HLA-DOAP06340 RNU6-98P-201ENST00000384173 107 ntBASIC5.28□□□□□ -1.56
HLA-DOAP06340 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HLA-DOAP06340 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC5.28□□□□□ -1.56
HLA-DOAP06340 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
HLA-DOAP06340 AL592291.1-201ENST00000403830 352 ntBASIC5.28□□□□□ -1.56
HLA-DOAP06340 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC5.28□□□□□ -1.56
HLA-DOAP06340 MTND4LP11-201ENST00000422184 280 ntBASIC5.28□□□□□ -1.56
HLA-DOAP06340 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC5.28□□□□□ -1.56
HLA-DOAP06340 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC5.28□□□□□ -1.56
HLA-DOAP06340 CDY14P-201ENST00000431260 1014 ntBASIC5.28□□□□□ -1.56
HLA-DOAP06340 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC5.28□□□□□ -1.56
HLA-DOAP06340 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC5.28□□□□□ -1.56
HLA-DOAP06340 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms