Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.3□□□□□ -1.72
COL2A1P02458 AL583832.1-201ENST00000603227 784 ntBASIC4.3□□□□□ -1.72
COL2A1P02458 OR4H6P-202ENST00000603819 340 ntBASIC4.3□□□□□ -1.72
COL2A1P02458 AL163642.2-201ENST00000604722 1019 ntBASIC4.3□□□□□ -1.72
COL2A1P02458 AP001033.2-201ENST00000609701 1003 ntBASIC4.3□□□□□ -1.72
COL2A1P02458 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC4.3□□□□□ -1.72
COL2A1P02458 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.3□□□□□ -1.72
COL2A1P02458 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
COL2A1P02458 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.29□□□□□ -1.72
COL2A1P02458 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
COL2A1P02458 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC4.29□□□□□ -1.72
COL2A1P02458 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
COL2A1P02458 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.29□□□□□ -1.72
COL2A1P02458 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
COL2A1P02458 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.29□□□□□ -1.72
COL2A1P02458 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
COL2A1P02458 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
COL2A1P02458 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.29□□□□□ -1.72
COL2A1P02458 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
COL2A1P02458 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
COL2A1P02458 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
COL2A1P02458 MIR513A2-201ENST00000385249 127 ntBASIC4.29□□□□□ -1.72
COL2A1P02458 AL512649.1-201ENST00000428997 581 ntBASIC4.29□□□□□ -1.72
COL2A1P02458 AL645931.1-201ENST00000439737 410 ntBASIC4.29□□□□□ -1.72
COL2A1P02458 AC010655.1-201ENST00000449336 292 ntBASIC4.29□□□□□ -1.72
COL2A1P02458 EIF4A1P11-201ENST00000451239 222 ntBASIC4.29□□□□□ -1.72
COL2A1P02458 AC099563.1-201ENST00000456086 418 ntBASIC4.29□□□□□ -1.72
COL2A1P02458 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.29□□□□□ -1.72
COL2A1P02458 RN7SL429P-201ENST00000479090 223 ntBASIC4.29□□□□□ -1.72
COL2A1P02458 RN7SL489P-201ENST00000486185 223 ntBASIC4.29□□□□□ -1.72
COL2A1P02458 RN7SL327P-201ENST00000488659 223 ntBASIC4.29□□□□□ -1.72
COL2A1P02458 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
COL2A1P02458 TRAV31-201ENST00000502780 342 ntBASIC4.29□□□□□ -1.72
COL2A1P02458 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
COL2A1P02458 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.29□□□□□ -1.72
COL2A1P02458 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.29□□□□□ -1.72
COL2A1P02458 AGGF1P5-201ENST00000567900 919 ntBASIC4.29□□□□□ -1.72
COL2A1P02458 AC012493.2-201ENST00000595083 291 ntBASIC4.29□□□□□ -1.72
COL2A1P02458 AC008638.3-201ENST00000603341 463 ntBASIC4.29□□□□□ -1.72
COL2A1P02458 AC010680.3-201ENST00000604215 520 ntBASIC4.29□□□□□ -1.72
COL2A1P02458 RN7SL853P-201ENST00000617250 223 ntBASIC4.29□□□□□ -1.72
COL2A1P02458 AL162233.1-201ENST00000620014 944 ntBASIC4.29□□□□□ -1.72
COL2A1P02458 AP006248.3-201ENST00000623580 594 ntBASIC4.29□□□□□ -1.72
COL2A1P02458 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.29□□□□□ -1.72
COL2A1P02458 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC4.29□□□□□ -1.72
COL2A1P02458 ABBA01000935.2-201ENST00000637477 838 ntBASIC4.29□□□□□ -1.72
COL2A1P02458 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.29□□□□□ -1.72
COL2A1P02458 AC106754.1-201ENST00000562632 1513 ntBASIC4.29□□□□□ -1.72
COL2A1P02458 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
COL2A1P02458 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC4.29□□□□□ -1.72
COL2A1P02458 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
COL2A1P02458 MAPK10-253ENST00000641010 4072 ntBASIC4.28□□□□□ -1.72
COL2A1P02458 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.28□□□□□ -1.72
COL2A1P02458 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
COL2A1P02458 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.28□□□□□ -1.72
COL2A1P02458 LINC01109-201ENST00000603837 3081 ntBASIC4.28□□□□□ -1.72
COL2A1P02458 XKRY2-202ENST00000623874 1581 ntBASIC4.28□□□□□ -1.72
COL2A1P02458 XKRY-202ENST00000624960 1581 ntBASIC4.28□□□□□ -1.72
COL2A1P02458 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
COL2A1P02458 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
COL2A1P02458 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.28□□□□□ -1.72
COL2A1P02458 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC4.28□□□□□ -1.72
COL2A1P02458 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
COL2A1P02458 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
COL2A1P02458 RNU6-891P-201ENST00000384280 111 ntBASIC4.28□□□□□ -1.72
COL2A1P02458 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC4.28□□□□□ -1.72
COL2A1P02458 RN7SKP111-201ENST00000410349 271 ntBASIC4.28□□□□□ -1.72
COL2A1P02458 SDCBPP2-201ENST00000424643 885 ntBASIC4.28□□□□□ -1.72
COL2A1P02458 AC097713.2-201ENST00000430199 356 ntBASIC4.28□□□□□ -1.72
COL2A1P02458 AC073063.1-201ENST00000434352 607 ntBASIC4.28□□□□□ -1.72
COL2A1P02458 SETP8-201ENST00000435341 628 ntBASIC4.28□□□□□ -1.72
COL2A1P02458 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC4.28□□□□□ -1.72
COL2A1P02458 TRBV12-2-201ENST00000489763 344 ntBASIC4.28□□□□□ -1.72
COL2A1P02458 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC4.28□□□□□ -1.72
COL2A1P02458 RNU6-579P-201ENST00000516879 102 ntBASIC4.28□□□□□ -1.72
COL2A1P02458 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.28□□□□□ -1.72
COL2A1P02458 ZKSCAN7P1-201ENST00000543668 673 ntBASIC4.28□□□□□ -1.72
COL2A1P02458 AC091515.1-201ENST00000548110 679 ntBASIC4.28□□□□□ -1.72
COL2A1P02458 AC027281.1-201ENST00000574178 758 ntBASIC4.28□□□□□ -1.72
COL2A1P02458 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4.28□□□□□ -1.72
COL2A1P02458 MIR7851-201ENST00000610611 160 ntBASIC4.28□□□□□ -1.72
COL2A1P02458 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.28□□□□□ -1.72
COL2A1P02458 AL732618.1-201ENST00000623251 301 ntBASIC4.28□□□□□ -1.72
COL2A1P02458 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC4.28□□□□□ -1.72
COL2A1P02458 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.28□□□□□ -1.72
COL2A1P02458 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
COL2A1P02458 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.27□□□□□ -1.73
COL2A1P02458 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
COL2A1P02458 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
COL2A1P02458 AL445523.1-201ENST00000451184 1362 ntBASIC4.27□□□□□ -1.73
COL2A1P02458 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
COL2A1P02458 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
COL2A1P02458 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
COL2A1P02458 AC093535.2-201ENST00000624769 2326 ntBASIC4.27□□□□□ -1.73
COL2A1P02458 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
COL2A1P02458 SNORA63.3-201ENST00000362682 132 ntBASIC4.27□□□□□ -1.73
COL2A1P02458 U3.26-201ENST00000391236 204 ntBASIC4.27□□□□□ -1.73
COL2A1P02458 RN7SKP284-201ENST00000411002 343 ntBASIC4.27□□□□□ -1.73
COL2A1P02458 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.27□□□□□ -1.73
COL2A1P02458 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms