Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AC015912.2-201ENST00000571053 181 ntBASIC4.15□□□□□ -1.75
ZIC3O60481 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC4.15□□□□□ -1.75
ZIC3O60481 AC112220.3-201ENST00000605502 502 ntBASIC4.15□□□□□ -1.75
ZIC3O60481 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC4.15□□□□□ -1.75
ZIC3O60481 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC4.15□□□□□ -1.75
ZIC3O60481 AC004223.4-201ENST00000612426 332 ntBASIC4.15□□□□□ -1.75
ZIC3O60481 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
ZIC3O60481 AC122133.1-201ENST00000613964 233 ntBASIC4.15□□□□□ -1.75
ZIC3O60481 AL607023.1-201ENST00000620045 248 ntBASIC4.15□□□□□ -1.75
ZIC3O60481 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.15□□□□□ -1.75
ZIC3O60481 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
ZIC3O60481 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
ZIC3O60481 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
ZIC3O60481 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
ZIC3O60481 AC025125.1-201ENST00000624743 1922 ntBASIC4.15□□□□□ -1.75
ZIC3O60481 AP001642.1-201ENST00000624727 2117 ntBASIC4.15□□□□□ -1.75
ZIC3O60481 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.15□□□□□ -1.75
ZIC3O60481 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
ZIC3O60481 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
ZIC3O60481 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
ZIC3O60481 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.14□□□□□ -1.75
ZIC3O60481 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
ZIC3O60481 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.14□□□□□ -1.75
ZIC3O60481 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
ZIC3O60481 SALL4P2-201ENST00000423288 2910 ntBASIC4.14□□□□□ -1.75
ZIC3O60481 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.14□□□□□ -1.75
ZIC3O60481 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.14□□□□□ -1.75
ZIC3O60481 CDR1-202ENST00000625883 1485 ntBASIC4.14□□□□□ -1.75
ZIC3O60481 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
ZIC3O60481 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
ZIC3O60481 MIR659-201ENST00000384963 97 ntBASIC4.14□□□□□ -1.75
ZIC3O60481 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
ZIC3O60481 AL121978.1-201ENST00000402778 359 ntBASIC4.14□□□□□ -1.75
ZIC3O60481 AL078604.1-201ENST00000404609 466 ntBASIC4.14□□□□□ -1.75
ZIC3O60481 NCSTNP1-201ENST00000406229 144 ntBASIC4.14□□□□□ -1.75
ZIC3O60481 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.14□□□□□ -1.75
ZIC3O60481 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.14□□□□□ -1.75
ZIC3O60481 AC008280.1-201ENST00000418851 412 ntBASIC4.14□□□□□ -1.75
ZIC3O60481 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC4.14□□□□□ -1.75
ZIC3O60481 UQCRBP1-201ENST00000421129 336 ntBASIC4.14□□□□□ -1.75
ZIC3O60481 MTCO3P1-205ENST00000422088 832 ntBASIC4.14□□□□□ -1.75
ZIC3O60481 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.14□□□□□ -1.75
ZIC3O60481 AL022400.1-201ENST00000423946 935 ntBASIC4.14□□□□□ -1.75
ZIC3O60481 IPMKP1-201ENST00000425988 855 ntBASIC4.14□□□□□ -1.75
ZIC3O60481 AL031736.2-201ENST00000426573 787 ntBASIC4.14□□□□□ -1.75
ZIC3O60481 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.14□□□□□ -1.75
ZIC3O60481 AC068287.1-201ENST00000430283 295 ntBASIC4.14□□□□□ -1.75
ZIC3O60481 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4.14□□□□□ -1.75
ZIC3O60481 VN1R108P-201ENST00000431580 830 ntBASIC4.14□□□□□ -1.75
ZIC3O60481 RPS25P9-201ENST00000435591 252 ntBASIC4.14□□□□□ -1.75
ZIC3O60481 ISCA1P2-201ENST00000438679 421 ntBASIC4.14□□□□□ -1.75
ZIC3O60481 AL450263.2-201ENST00000439400 589 ntBASIC4.14□□□□□ -1.75
ZIC3O60481 RPS26P2-201ENST00000440331 348 ntBASIC4.14□□□□□ -1.75
ZIC3O60481 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.14□□□□□ -1.75
ZIC3O60481 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.14□□□□□ -1.75
ZIC3O60481 AL591503.2-201ENST00000442314 1005 ntBASIC4.14□□□□□ -1.75
ZIC3O60481 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC4.14□□□□□ -1.75
ZIC3O60481 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC4.14□□□□□ -1.75
ZIC3O60481 EEF1A1P1-201ENST00000447052 739 ntBASIC4.14□□□□□ -1.75
ZIC3O60481 RPS27AP8-201ENST00000452665 445 ntBASIC4.14□□□□□ -1.75
ZIC3O60481 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC4.14□□□□□ -1.75
ZIC3O60481 snoU13.1-201ENST00000459157 104 ntBASIC4.14□□□□□ -1.75
ZIC3O60481 RPL7P38-201ENST00000488396 739 ntBASIC4.14□□□□□ -1.75
ZIC3O60481 RN7SL346P-201ENST00000491561 294 ntBASIC4.14□□□□□ -1.75
ZIC3O60481 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC4.14□□□□□ -1.75
ZIC3O60481 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.14□□□□□ -1.75
ZIC3O60481 MTCO1P30-201ENST00000515244 580 ntBASIC4.14□□□□□ -1.75
ZIC3O60481 AP000827.1-201ENST00000527814 258 ntBASIC4.14□□□□□ -1.75
ZIC3O60481 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
ZIC3O60481 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.14□□□□□ -1.75
ZIC3O60481 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.14□□□□□ -1.75
ZIC3O60481 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.14□□□□□ -1.75
ZIC3O60481 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC4.14□□□□□ -1.75
ZIC3O60481 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC4.14□□□□□ -1.75
ZIC3O60481 EIF5A2P1-201ENST00000564027 460 ntBASIC4.14□□□□□ -1.75
ZIC3O60481 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.14□□□□□ -1.75
ZIC3O60481 AP005119.2-201ENST00000579735 1105 ntBASIC4.14□□□□□ -1.75
ZIC3O60481 AC209154.1-201ENST00000582156 337 ntBASIC4.14□□□□□ -1.75
ZIC3O60481 RN7SL435P-201ENST00000584418 282 ntBASIC4.14□□□□□ -1.75
ZIC3O60481 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.14□□□□□ -1.75
ZIC3O60481 AC068790.4-201ENST00000602474 263 ntBASIC4.14□□□□□ -1.75
ZIC3O60481 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.14□□□□□ -1.75
ZIC3O60481 CLPTM1LP1-201ENST00000604519 484 ntBASIC4.14□□□□□ -1.75
ZIC3O60481 AC010738.1-201ENST00000604970 987 ntBASIC4.14□□□□□ -1.75
ZIC3O60481 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC4.14□□□□□ -1.75
ZIC3O60481 AC019193.2-201ENST00000610012 634 ntBASIC4.14□□□□□ -1.75
ZIC3O60481 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.14□□□□□ -1.75
ZIC3O60481 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC4.14□□□□□ -1.75
ZIC3O60481 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.14□□□□□ -1.75
ZIC3O60481 AC009229.4-201ENST00000623854 1947 ntBASIC4.14□□□□□ -1.75
ZIC3O60481 AL592148.3-201ENST00000608771 2646 ntBASIC4.14□□□□□ -1.75
ZIC3O60481 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
ZIC3O60481 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
ZIC3O60481 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
ZIC3O60481 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
ZIC3O60481 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
ZIC3O60481 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
ZIC3O60481 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.14□□□□□ -1.75
ZIC3O60481 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
ZIC3O60481 AC107027.3-201ENST00000565095 3473 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms